Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RTL9Q8NET4 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC19.96■□□□□ 0.79
RTL9Q8NET4 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC19.96■□□□□ 0.79
RTL9Q8NET4 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
RTL9Q8NET4 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
RTL9Q8NET4 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC19.96■□□□□ 0.79
RTL9Q8NET4 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC19.96■□□□□ 0.79
RTL9Q8NET4 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RTL9Q8NET4 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC19.96■□□□□ 0.79
RTL9Q8NET4 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC19.96■□□□□ 0.79
RTL9Q8NET4 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
RTL9Q8NET4 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
RTL9Q8NET4 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC19.96■□□□□ 0.79
RTL9Q8NET4 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC19.96■□□□□ 0.79
RTL9Q8NET4 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
RTL9Q8NET4 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.79
RTL9Q8NET4 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.79
RTL9Q8NET4 MEP1AP4-201ENST00000423244 1087 ntBASIC19.95■□□□□ 0.79
RTL9Q8NET4 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC19.95■□□□□ 0.79
RTL9Q8NET4 AC023310.3-201ENST00000557027 670 ntBASIC19.95■□□□□ 0.79
RTL9Q8NET4 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC19.95■□□□□ 0.79
RTL9Q8NET4 AC100756.1-201ENST00000562736 682 ntBASIC19.95■□□□□ 0.79
RTL9Q8NET4 AC138749.3-201ENST00000567691 622 ntBASIC19.95■□□□□ 0.79
RTL9Q8NET4 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC19.95■□□□□ 0.79
RTL9Q8NET4 AC008494.3-201ENST00000606615 944 ntBASIC19.95■□□□□ 0.79
RTL9Q8NET4 AC116165.1-201ENST00000611806 668 ntBASIC19.95■□□□□ 0.79
RTL9Q8NET4 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC19.95■□□□□ 0.78
RTL9Q8NET4 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RTL9Q8NET4 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
RTL9Q8NET4 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RTL9Q8NET4 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RTL9Q8NET4 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
RTL9Q8NET4 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RTL9Q8NET4 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
RTL9Q8NET4 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RTL9Q8NET4 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
RTL9Q8NET4 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC19.95■□□□□ 0.78
RTL9Q8NET4 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RTL9Q8NET4 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
RTL9Q8NET4 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RTL9Q8NET4 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
RTL9Q8NET4 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC19.95■□□□□ 0.78
RTL9Q8NET4 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC19.95■□□□□ 0.78
RTL9Q8NET4 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC19.95■□□□□ 0.78
RTL9Q8NET4 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC19.95■□□□□ 0.78
RTL9Q8NET4 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC19.95■□□□□ 0.78
RTL9Q8NET4 AC022494.1-201ENST00000466044 728 ntBASIC19.95■□□□□ 0.78
RTL9Q8NET4 FXR1-221ENST00000491674 365 ntTSL 2 BASIC19.95■□□□□ 0.78
RTL9Q8NET4 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RTL9Q8NET4 RRP7BP-205ENST00000566851 833 ntBASIC19.95■□□□□ 0.78
RTL9Q8NET4 AL391069.4-201ENST00000609583 481 ntBASIC19.95■□□□□ 0.78
RTL9Q8NET4 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RTL9Q8NET4 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RTL9Q8NET4 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RTL9Q8NET4 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RTL9Q8NET4 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC19.94■□□□□ 0.78
RTL9Q8NET4 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RTL9Q8NET4 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
RTL9Q8NET4 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RTL9Q8NET4 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
RTL9Q8NET4 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
RTL9Q8NET4 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC19.94■□□□□ 0.78
RTL9Q8NET4 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RTL9Q8NET4 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
RTL9Q8NET4 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
RTL9Q8NET4 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC19.94■□□□□ 0.78
RTL9Q8NET4 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC19.94■□□□□ 0.78
RTL9Q8NET4 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
RTL9Q8NET4 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
RTL9Q8NET4 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC19.94■□□□□ 0.78
RTL9Q8NET4 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
RTL9Q8NET4 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
RTL9Q8NET4 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RTL9Q8NET4 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RTL9Q8NET4 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RTL9Q8NET4 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RTL9Q8NET4 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
RTL9Q8NET4 OSM-203ENST00000403463 464 ntTSL 3 BASIC19.94■□□□□ 0.78
RTL9Q8NET4 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC19.94■□□□□ 0.78
RTL9Q8NET4 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC19.94■□□□□ 0.78
RTL9Q8NET4 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC19.94■□□□□ 0.78
RTL9Q8NET4 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC19.94■□□□□ 0.78
RTL9Q8NET4 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RTL9Q8NET4 TPRX2P-201ENST00000535362 881 ntBASIC19.94■□□□□ 0.78
RTL9Q8NET4 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC19.94■□□□□ 0.78
RTL9Q8NET4 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
RTL9Q8NET4 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RTL9Q8NET4 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC19.94■□□□□ 0.78
RTL9Q8NET4 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC19.94■□□□□ 0.78
RTL9Q8NET4 AC007431.3-201ENST00000623221 587 ntBASIC19.94■□□□□ 0.78
RTL9Q8NET4 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RTL9Q8NET4 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC19.94■□□□□ 0.78
RTL9Q8NET4 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC19.94■□□□□ 0.78
RTL9Q8NET4 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RTL9Q8NET4 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
RTL9Q8NET4 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC19.94■□□□□ 0.78
RTL9Q8NET4 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RTL9Q8NET4 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
RTL9Q8NET4 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RTL9Q8NET4 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms