Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC20.16■□□□□ 0.82
SYNE4Q8N205 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC20.16■□□□□ 0.82
SYNE4Q8N205 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SYNE4Q8N205 AC092658.1-201ENST00000505836 891 ntBASIC20.16■□□□□ 0.82
SYNE4Q8N205 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC20.16■□□□□ 0.82
SYNE4Q8N205 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC20.16■□□□□ 0.82
SYNE4Q8N205 AC055876.2-201ENST00000531834 546 ntBASIC20.16■□□□□ 0.82
SYNE4Q8N205 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC20.16■□□□□ 0.82
SYNE4Q8N205 AC123567.1-201ENST00000548294 1261 ntBASIC20.16■□□□□ 0.82
SYNE4Q8N205 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC20.16■□□□□ 0.82
SYNE4Q8N205 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC20.16■□□□□ 0.82
SYNE4Q8N205 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
SYNE4Q8N205 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
SYNE4Q8N205 AL512343.1-201ENST00000605837 169 ntBASIC20.16■□□□□ 0.82
SYNE4Q8N205 AL606495.2-201ENST00000605867 535 ntBASIC20.16■□□□□ 0.82
SYNE4Q8N205 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SYNE4Q8N205 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SYNE4Q8N205 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SYNE4Q8N205 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SYNE4Q8N205 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SYNE4Q8N205 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
SYNE4Q8N205 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC20.15■□□□□ 0.82
SYNE4Q8N205 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SYNE4Q8N205 AC079328.2-201ENST00000561241 3354 ntBASIC20.15■□□□□ 0.82
SYNE4Q8N205 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC20.15■□□□□ 0.82
SYNE4Q8N205 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
SYNE4Q8N205 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC20.15■□□□□ 0.82
SYNE4Q8N205 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC20.15■□□□□ 0.82
SYNE4Q8N205 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SYNE4Q8N205 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SYNE4Q8N205 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
SYNE4Q8N205 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
SYNE4Q8N205 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
SYNE4Q8N205 TMEM14DP-201ENST00000422205 345 ntBASIC20.15■□□□□ 0.82
SYNE4Q8N205 TTTY23B-201ENST00000442790 549 ntBASIC20.15■□□□□ 0.82
SYNE4Q8N205 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC20.15■□□□□ 0.82
SYNE4Q8N205 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
SYNE4Q8N205 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC20.15■□□□□ 0.82
SYNE4Q8N205 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC20.15■□□□□ 0.82
SYNE4Q8N205 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC20.15■□□□□ 0.82
SYNE4Q8N205 LINC01115-203ENST00000606068 577 ntBASIC20.15■□□□□ 0.82
SYNE4Q8N205 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SYNE4Q8N205 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SYNE4Q8N205 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
SYNE4Q8N205 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC20.15■□□□□ 0.82
SYNE4Q8N205 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SYNE4Q8N205 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC20.15■□□□□ 0.82
SYNE4Q8N205 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
SYNE4Q8N205 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SYNE4Q8N205 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SYNE4Q8N205 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SYNE4Q8N205 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
SYNE4Q8N205 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC20.14■□□□□ 0.82
SYNE4Q8N205 CDC14C-201ENST00000428251 1719 ntBASIC20.14■□□□□ 0.81
SYNE4Q8N205 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SYNE4Q8N205 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SYNE4Q8N205 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC20.14■□□□□ 0.81
SYNE4Q8N205 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
SYNE4Q8N205 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
SYNE4Q8N205 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC20.14■□□□□ 0.81
SYNE4Q8N205 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SYNE4Q8N205 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SYNE4Q8N205 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
SYNE4Q8N205 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC20.14■□□□□ 0.81
SYNE4Q8N205 FADS2-205ENST00000517839 469 ntTSL 3 BASIC20.14■□□□□ 0.81
SYNE4Q8N205 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC20.14■□□□□ 0.81
SYNE4Q8N205 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC20.14■□□□□ 0.81
SYNE4Q8N205 AC092337.1-201ENST00000568699 1129 ntBASIC20.14■□□□□ 0.81
SYNE4Q8N205 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC20.14■□□□□ 0.81
SYNE4Q8N205 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
SYNE4Q8N205 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
SYNE4Q8N205 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
SYNE4Q8N205 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC20.14■□□□□ 0.81
SYNE4Q8N205 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SYNE4Q8N205 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SYNE4Q8N205 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SYNE4Q8N205 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC20.13■□□□□ 0.81
SYNE4Q8N205 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
SYNE4Q8N205 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SYNE4Q8N205 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC20.13■□□□□ 0.81
SYNE4Q8N205 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC20.13■□□□□ 0.81
SYNE4Q8N205 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
SYNE4Q8N205 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC20.13■□□□□ 0.81
SYNE4Q8N205 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC20.13■□□□□ 0.81
SYNE4Q8N205 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SYNE4Q8N205 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
SYNE4Q8N205 AL691432.1-201ENST00000596308 1422 ntBASIC20.13■□□□□ 0.81
SYNE4Q8N205 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
SYNE4Q8N205 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
SYNE4Q8N205 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SYNE4Q8N205 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC20.13■□□□□ 0.81
SYNE4Q8N205 AZGP1P1-201ENST00000411909 902 ntBASIC20.13■□□□□ 0.81
SYNE4Q8N205 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC20.13■□□□□ 0.81
SYNE4Q8N205 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
SYNE4Q8N205 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC20.13■□□□□ 0.81
SYNE4Q8N205 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC20.13■□□□□ 0.81
SYNE4Q8N205 NOP2-211ENST00000540228 668 ntTSL 2 BASIC20.13■□□□□ 0.81
SYNE4Q8N205 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC20.13■□□□□ 0.81
SYNE4Q8N205 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC20.13■□□□□ 0.81
SYNE4Q8N205 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms