Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 FTH1-202ENST00000526640 786 ntTSL 2 BASIC16.72■□□□□ 0.27
SIX5Q8N196 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC16.72■□□□□ 0.27
SIX5Q8N196 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.72■□□□□ 0.27
SIX5Q8N196 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC16.72■□□□□ 0.27
SIX5Q8N196 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC16.72■□□□□ 0.27
SIX5Q8N196 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.72■□□□□ 0.27
SIX5Q8N196 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.72■□□□□ 0.27
SIX5Q8N196 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.72■□□□□ 0.27
SIX5Q8N196 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
SIX5Q8N196 KRT8P44-201ENST00000441609 1350 ntBASIC16.72■□□□□ 0.27
SIX5Q8N196 KRT8P12-202ENST00000472924 1397 ntBASIC16.72■□□□□ 0.27
SIX5Q8N196 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SIX5Q8N196 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
SIX5Q8N196 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SIX5Q8N196 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SIX5Q8N196 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.72■□□□□ 0.27
SIX5Q8N196 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SIX5Q8N196 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
SIX5Q8N196 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.71■□□□□ 0.27
SIX5Q8N196 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC16.71■□□□□ 0.27
SIX5Q8N196 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SIX5Q8N196 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SIX5Q8N196 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SIX5Q8N196 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SIX5Q8N196 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.71■□□□□ 0.27
SIX5Q8N196 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SIX5Q8N196 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SIX5Q8N196 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SIX5Q8N196 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
SIX5Q8N196 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SIX5Q8N196 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SIX5Q8N196 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SIX5Q8N196 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
SIX5Q8N196 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC16.71■□□□□ 0.27
SIX5Q8N196 BCYRN1-201ENST00000418539 200 ntBASIC16.71■□□□□ 0.27
SIX5Q8N196 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC16.71■□□□□ 0.27
SIX5Q8N196 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC16.71■□□□□ 0.27
SIX5Q8N196 FADS2-205ENST00000517839 469 ntTSL 3 BASIC16.71■□□□□ 0.27
SIX5Q8N196 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.71■□□□□ 0.27
SIX5Q8N196 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SIX5Q8N196 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC16.71■□□□□ 0.27
SIX5Q8N196 PIGL-212ENST00000581006 554 ntTSL 4 BASIC16.71■□□□□ 0.27
SIX5Q8N196 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC16.71■□□□□ 0.27
SIX5Q8N196 AC015936.2-201ENST00000593177 259 ntBASIC16.71■□□□□ 0.27
SIX5Q8N196 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.71■□□□□ 0.27
SIX5Q8N196 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.71■□□□□ 0.27
SIX5Q8N196 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16.71■□□□□ 0.27
SIX5Q8N196 AL033527.5-201ENST00000641382 801 ntBASIC16.71■□□□□ 0.27
SIX5Q8N196 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.71■□□□□ 0.27
SIX5Q8N196 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SIX5Q8N196 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.71■□□□□ 0.27
SIX5Q8N196 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.71■□□□□ 0.27
SIX5Q8N196 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SIX5Q8N196 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SIX5Q8N196 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
SIX5Q8N196 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SIX5Q8N196 AC108860.2-201ENST00000562760 2183 ntBASIC16.71■□□□□ 0.27
SIX5Q8N196 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.71■□□□□ 0.27
SIX5Q8N196 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
SIX5Q8N196 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
SIX5Q8N196 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SIX5Q8N196 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
SIX5Q8N196 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SIX5Q8N196 ABALON-201ENST00000629058 1903 ntBASIC16.7■□□□□ 0.26
SIX5Q8N196 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.7■□□□□ 0.26
SIX5Q8N196 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SIX5Q8N196 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SIX5Q8N196 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SIX5Q8N196 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SIX5Q8N196 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SIX5Q8N196 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.7■□□□□ 0.26
SIX5Q8N196 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SIX5Q8N196 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.7■□□□□ 0.26
SIX5Q8N196 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
SIX5Q8N196 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SIX5Q8N196 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SIX5Q8N196 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
SIX5Q8N196 SLC25A1P3-201ENST00000395415 828 ntBASIC16.7■□□□□ 0.26
SIX5Q8N196 HAUS4P1-201ENST00000406739 1145 ntBASIC16.7■□□□□ 0.26
SIX5Q8N196 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC16.7■□□□□ 0.26
SIX5Q8N196 KRT43P-201ENST00000434019 910 ntBASIC16.7■□□□□ 0.26
SIX5Q8N196 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC16.7■□□□□ 0.26
SIX5Q8N196 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC16.7■□□□□ 0.26
SIX5Q8N196 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC16.7■□□□□ 0.26
SIX5Q8N196 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SIX5Q8N196 PARP8-218ENST00000513738 596 ntTSL 4 BASIC16.7■□□□□ 0.26
SIX5Q8N196 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC16.7■□□□□ 0.26
SIX5Q8N196 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
SIX5Q8N196 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC16.7■□□□□ 0.26
SIX5Q8N196 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC16.7■□□□□ 0.26
SIX5Q8N196 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
SIX5Q8N196 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC16.7■□□□□ 0.26
SIX5Q8N196 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SIX5Q8N196 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SIX5Q8N196 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.7■□□□□ 0.26
SIX5Q8N196 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
SIX5Q8N196 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SIX5Q8N196 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
SIX5Q8N196 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.7■□□□□ 0.26
SIX5Q8N196 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms