Protein–RNA interactions for Protein: Q6Q0C0

TRAF7, E3 ubiquitin-protein ligase TRAF7, humanhuman

Predictions only

Length 670 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF7Q6Q0C0 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAF7Q6Q0C0 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRAF7Q6Q0C0 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAF7Q6Q0C0 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC17.67■□□□□ 0.42
TRAF7Q6Q0C0 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAF7Q6Q0C0 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRAF7Q6Q0C0 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAF7Q6Q0C0 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAF7Q6Q0C0 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAF7Q6Q0C0 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC17.66■□□□□ 0.42
TRAF7Q6Q0C0 Z97205.2-201ENST00000564697 1639 ntBASIC17.66■□□□□ 0.42
TRAF7Q6Q0C0 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
TRAF7Q6Q0C0 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.66■□□□□ 0.42
TRAF7Q6Q0C0 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAF7Q6Q0C0 ANKRD19P-201ENST00000338192 862 ntBASIC17.66■□□□□ 0.42
TRAF7Q6Q0C0 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRAF7Q6Q0C0 NSL1-201ENST00000366976 722 ntTSL 2 BASIC17.66■□□□□ 0.42
TRAF7Q6Q0C0 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
TRAF7Q6Q0C0 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
TRAF7Q6Q0C0 AC007389.4-201ENST00000454674 793 ntBASIC17.66■□□□□ 0.42
TRAF7Q6Q0C0 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRAF7Q6Q0C0 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAF7Q6Q0C0 MIR6775-201ENST00000617557 69 ntBASIC17.66■□□□□ 0.42
TRAF7Q6Q0C0 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC17.66■□□□□ 0.42
TRAF7Q6Q0C0 AL033527.4-201ENST00000641026 673 ntBASIC17.66■□□□□ 0.42
TRAF7Q6Q0C0 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
TRAF7Q6Q0C0 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAF7Q6Q0C0 GGT3P-204ENST00000453783 1664 ntBASIC17.66■□□□□ 0.42
TRAF7Q6Q0C0 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.66■□□□□ 0.42
TRAF7Q6Q0C0 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.66■□□□□ 0.42
TRAF7Q6Q0C0 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAF7Q6Q0C0 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAF7Q6Q0C0 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.66■□□□□ 0.42
TRAF7Q6Q0C0 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAF7Q6Q0C0 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAF7Q6Q0C0 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAF7Q6Q0C0 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAF7Q6Q0C0 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.65■□□□□ 0.42
TRAF7Q6Q0C0 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAF7Q6Q0C0 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC17.65■□□□□ 0.42
TRAF7Q6Q0C0 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRAF7Q6Q0C0 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAF7Q6Q0C0 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAF7Q6Q0C0 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRAF7Q6Q0C0 AC106820.2-201ENST00000563775 3264 ntBASIC17.65■□□□□ 0.42
TRAF7Q6Q0C0 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAF7Q6Q0C0 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.65■□□□□ 0.42
TRAF7Q6Q0C0 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.65■□□□□ 0.42
TRAF7Q6Q0C0 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRAF7Q6Q0C0 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAF7Q6Q0C0 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAF7Q6Q0C0 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC17.65■□□□□ 0.42
TRAF7Q6Q0C0 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAF7Q6Q0C0 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC17.65■□□□□ 0.42
TRAF7Q6Q0C0 CROCCP4-201ENST00000457096 498 ntBASIC17.65■□□□□ 0.42
TRAF7Q6Q0C0 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC17.65■□□□□ 0.42
TRAF7Q6Q0C0 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC17.65■□□□□ 0.42
TRAF7Q6Q0C0 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC17.65■□□□□ 0.42
TRAF7Q6Q0C0 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC17.65■□□□□ 0.42
TRAF7Q6Q0C0 AC092552.1-201ENST00000547243 906 ntBASIC17.65■□□□□ 0.42
TRAF7Q6Q0C0 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAF7Q6Q0C0 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC17.65■□□□□ 0.42
TRAF7Q6Q0C0 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC17.65■□□□□ 0.42
TRAF7Q6Q0C0 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC17.65■□□□□ 0.42
TRAF7Q6Q0C0 AC020916.1-201ENST00000587762 1774 ntBASIC17.65■□□□□ 0.42
TRAF7Q6Q0C0 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAF7Q6Q0C0 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAF7Q6Q0C0 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRAF7Q6Q0C0 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAF7Q6Q0C0 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC17.65■□□□□ 0.42
TRAF7Q6Q0C0 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRAF7Q6Q0C0 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
TRAF7Q6Q0C0 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
TRAF7Q6Q0C0 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAF7Q6Q0C0 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAF7Q6Q0C0 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
TRAF7Q6Q0C0 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC17.64■□□□□ 0.42
TRAF7Q6Q0C0 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.64■□□□□ 0.42
TRAF7Q6Q0C0 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.42
TRAF7Q6Q0C0 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.64■□□□□ 0.42
TRAF7Q6Q0C0 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
TRAF7Q6Q0C0 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRAF7Q6Q0C0 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.64■□□□□ 0.41
TRAF7Q6Q0C0 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAF7Q6Q0C0 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
TRAF7Q6Q0C0 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
TRAF7Q6Q0C0 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAF7Q6Q0C0 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAF7Q6Q0C0 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
TRAF7Q6Q0C0 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC17.64■□□□□ 0.41
TRAF7Q6Q0C0 HIST1H2BPS3-201ENST00000419683 341 ntBASIC17.64■□□□□ 0.41
TRAF7Q6Q0C0 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC17.64■□□□□ 0.41
TRAF7Q6Q0C0 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC17.64■□□□□ 0.41
TRAF7Q6Q0C0 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC17.64■□□□□ 0.41
TRAF7Q6Q0C0 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC17.64■□□□□ 0.41
TRAF7Q6Q0C0 PAM16-204ENST00000571941 674 ntTSL 3 BASIC17.64■□□□□ 0.41
TRAF7Q6Q0C0 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC17.64■□□□□ 0.41
TRAF7Q6Q0C0 LINC01115-203ENST00000606068 577 ntBASIC17.64■□□□□ 0.41
TRAF7Q6Q0C0 AL033527.5-201ENST00000641382 801 ntBASIC17.64■□□□□ 0.41
TRAF7Q6Q0C0 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms