Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CNKSR3Q6P9H4 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CNKSR3Q6P9H4 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
CNKSR3Q6P9H4 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.38■□□□□ 0.37
CNKSR3Q6P9H4 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
CNKSR3Q6P9H4 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CNKSR3Q6P9H4 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.38■□□□□ 0.37
CNKSR3Q6P9H4 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CNKSR3Q6P9H4 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
CNKSR3Q6P9H4 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CNKSR3Q6P9H4 FAM21FP-201ENST00000426241 1131 ntBASIC17.38■□□□□ 0.37
CNKSR3Q6P9H4 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC17.38■□□□□ 0.37
CNKSR3Q6P9H4 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC17.38■□□□□ 0.37
CNKSR3Q6P9H4 BCRP2-202ENST00000447763 634 ntBASIC17.38■□□□□ 0.37
CNKSR3Q6P9H4 BCRP6-201ENST00000510112 632 ntBASIC17.38■□□□□ 0.37
CNKSR3Q6P9H4 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC17.38■□□□□ 0.37
CNKSR3Q6P9H4 BCRP7-201ENST00000511549 544 ntBASIC17.38■□□□□ 0.37
CNKSR3Q6P9H4 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC17.38■□□□□ 0.37
CNKSR3Q6P9H4 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC17.38■□□□□ 0.37
CNKSR3Q6P9H4 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC17.38■□□□□ 0.37
CNKSR3Q6P9H4 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC17.38■□□□□ 0.37
CNKSR3Q6P9H4 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CNKSR3Q6P9H4 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.38■□□□□ 0.37
CNKSR3Q6P9H4 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CNKSR3Q6P9H4 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CNKSR3Q6P9H4 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CNKSR3Q6P9H4 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CNKSR3Q6P9H4 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CNKSR3Q6P9H4 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CNKSR3Q6P9H4 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CNKSR3Q6P9H4 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CNKSR3Q6P9H4 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CNKSR3Q6P9H4 AC060834.1-201ENST00000443027 2032 ntBASIC17.37■□□□□ 0.37
CNKSR3Q6P9H4 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CNKSR3Q6P9H4 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CNKSR3Q6P9H4 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
CNKSR3Q6P9H4 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CNKSR3Q6P9H4 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CNKSR3Q6P9H4 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CNKSR3Q6P9H4 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC17.37■□□□□ 0.37
CNKSR3Q6P9H4 RPL28-203ENST00000428193 573 ntTSL 2 BASIC17.37■□□□□ 0.37
CNKSR3Q6P9H4 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC17.37■□□□□ 0.37
CNKSR3Q6P9H4 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CNKSR3Q6P9H4 RPL7P3-201ENST00000441388 714 ntBASIC17.37■□□□□ 0.37
CNKSR3Q6P9H4 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CNKSR3Q6P9H4 AC068587.3-201ENST00000526613 355 ntBASIC17.37■□□□□ 0.37
CNKSR3Q6P9H4 RPL28-207ENST00000558815 616 ntTSL 2 BASIC17.37■□□□□ 0.37
CNKSR3Q6P9H4 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC17.37■□□□□ 0.37
CNKSR3Q6P9H4 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC17.37■□□□□ 0.37
CNKSR3Q6P9H4 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
CNKSR3Q6P9H4 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CNKSR3Q6P9H4 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC17.37■□□□□ 0.37
CNKSR3Q6P9H4 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
CNKSR3Q6P9H4 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CNKSR3Q6P9H4 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CNKSR3Q6P9H4 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
CNKSR3Q6P9H4 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CNKSR3Q6P9H4 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
CNKSR3Q6P9H4 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.37■□□□□ 0.37
CNKSR3Q6P9H4 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC17.37■□□□□ 0.37
CNKSR3Q6P9H4 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CNKSR3Q6P9H4 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CNKSR3Q6P9H4 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CNKSR3Q6P9H4 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CNKSR3Q6P9H4 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CNKSR3Q6P9H4 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CNKSR3Q6P9H4 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17.36■□□□□ 0.37
CNKSR3Q6P9H4 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.36■□□□□ 0.37
CNKSR3Q6P9H4 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CNKSR3Q6P9H4 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CNKSR3Q6P9H4 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CNKSR3Q6P9H4 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CNKSR3Q6P9H4 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CNKSR3Q6P9H4 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CNKSR3Q6P9H4 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
CNKSR3Q6P9H4 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CNKSR3Q6P9H4 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CNKSR3Q6P9H4 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CNKSR3Q6P9H4 GZMB-202ENST00000382540 816 ntTSL 5 BASIC17.36■□□□□ 0.37
CNKSR3Q6P9H4 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CNKSR3Q6P9H4 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC17.36■□□□□ 0.37
CNKSR3Q6P9H4 AC134915.1-201ENST00000426461 574 ntBASIC17.36■□□□□ 0.37
CNKSR3Q6P9H4 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC17.36■□□□□ 0.37
CNKSR3Q6P9H4 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC17.36■□□□□ 0.37
CNKSR3Q6P9H4 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC17.36■□□□□ 0.37
CNKSR3Q6P9H4 AC245100.5-201ENST00000452108 331 ntBASIC17.36■□□□□ 0.37
CNKSR3Q6P9H4 RPL13AP25-201ENST00000484130 612 ntBASIC17.36■□□□□ 0.37
CNKSR3Q6P9H4 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CNKSR3Q6P9H4 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC17.36■□□□□ 0.37
CNKSR3Q6P9H4 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC17.36■□□□□ 0.37
CNKSR3Q6P9H4 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC17.36■□□□□ 0.37
CNKSR3Q6P9H4 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CNKSR3Q6P9H4 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.36■□□□□ 0.37
CNKSR3Q6P9H4 RERG-209ENST00000546331 1383 ntTSL 2 BASIC17.36■□□□□ 0.37
CNKSR3Q6P9H4 AC141586.5-201ENST00000624546 2050 ntBASIC17.36■□□□□ 0.37
CNKSR3Q6P9H4 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CNKSR3Q6P9H4 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.36■□□□□ 0.37
CNKSR3Q6P9H4 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CNKSR3Q6P9H4 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CNKSR3Q6P9H4 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms