Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 TEX48-202ENST00000612244 662 ntTSL 3 BASIC18.31■□□□□ 0.52
CCDC62Q6P9F0 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
CCDC62Q6P9F0 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC62Q6P9F0 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC62Q6P9F0 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC62Q6P9F0 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC62Q6P9F0 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CCDC62Q6P9F0 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC62Q6P9F0 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC62Q6P9F0 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC62Q6P9F0 GGT3P-204ENST00000453783 1664 ntBASIC18.31■□□□□ 0.52
CCDC62Q6P9F0 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
CCDC62Q6P9F0 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CCDC62Q6P9F0 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC62Q6P9F0 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC62Q6P9F0 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC62Q6P9F0 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
CCDC62Q6P9F0 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC18.3■□□□□ 0.52
CCDC62Q6P9F0 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC62Q6P9F0 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC62Q6P9F0 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC62Q6P9F0 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC62Q6P9F0 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC18.3■□□□□ 0.52
CCDC62Q6P9F0 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC62Q6P9F0 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC18.3■□□□□ 0.52
CCDC62Q6P9F0 IMPDH1P4-201ENST00000445028 1534 ntBASIC18.3■□□□□ 0.52
CCDC62Q6P9F0 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC62Q6P9F0 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC62Q6P9F0 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC62Q6P9F0 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC18.3■□□□□ 0.52
CCDC62Q6P9F0 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC62Q6P9F0 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC62Q6P9F0 AL353779.1-201ENST00000434793 351 ntBASIC18.3■□□□□ 0.52
CCDC62Q6P9F0 GNAQP1-201ENST00000444815 1067 ntBASIC18.3■□□□□ 0.52
CCDC62Q6P9F0 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC62Q6P9F0 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC62Q6P9F0 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC18.3■□□□□ 0.52
CCDC62Q6P9F0 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC18.3■□□□□ 0.52
CCDC62Q6P9F0 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC18.3■□□□□ 0.52
CCDC62Q6P9F0 AL132655.2-201ENST00000596276 594 ntBASIC18.3■□□□□ 0.52
CCDC62Q6P9F0 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CCDC62Q6P9F0 AL033527.5-202ENST00000641632 1098 ntBASIC18.3■□□□□ 0.52
CCDC62Q6P9F0 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC18.3■□□□□ 0.52
CCDC62Q6P9F0 AC007541.1-201ENST00000570282 1469 ntBASIC18.3■□□□□ 0.52
CCDC62Q6P9F0 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC62Q6P9F0 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC62Q6P9F0 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.3■□□□□ 0.52
CCDC62Q6P9F0 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CCDC62Q6P9F0 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CCDC62Q6P9F0 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC18.3■□□□□ 0.52
CCDC62Q6P9F0 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC18.3■□□□□ 0.52
CCDC62Q6P9F0 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC62Q6P9F0 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC18.3■□□□□ 0.52
CCDC62Q6P9F0 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
CCDC62Q6P9F0 GCK-202ENST00000345378 2421 ntTSL 2 BASIC18.3■□□□□ 0.52
CCDC62Q6P9F0 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.3■□□□□ 0.52
CCDC62Q6P9F0 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC62Q6P9F0 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CCDC62Q6P9F0 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC18.3■□□□□ 0.52
CCDC62Q6P9F0 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC62Q6P9F0 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC62Q6P9F0 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC62Q6P9F0 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC18.3■□□□□ 0.52
CCDC62Q6P9F0 AC005622.1-201ENST00000636801 1703 ntBASIC18.29■□□□□ 0.52
CCDC62Q6P9F0 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC18.29■□□□□ 0.52
CCDC62Q6P9F0 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC62Q6P9F0 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CCDC62Q6P9F0 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC62Q6P9F0 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC18.29■□□□□ 0.52
CCDC62Q6P9F0 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC62Q6P9F0 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC18.29■□□□□ 0.52
CCDC62Q6P9F0 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC62Q6P9F0 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC62Q6P9F0 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC18.29■□□□□ 0.52
CCDC62Q6P9F0 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC62Q6P9F0 RASL12-203ENST00000434605 982 ntTSL 2 BASIC18.29■□□□□ 0.52
CCDC62Q6P9F0 AC114501.2-201ENST00000439631 535 ntBASIC18.29■□□□□ 0.52
CCDC62Q6P9F0 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC18.29■□□□□ 0.52
CCDC62Q6P9F0 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC18.29■□□□□ 0.52
CCDC62Q6P9F0 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC62Q6P9F0 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC18.29■□□□□ 0.52
CCDC62Q6P9F0 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC18.29■□□□□ 0.52
CCDC62Q6P9F0 AC104794.3-201ENST00000566840 1248 ntBASIC18.29■□□□□ 0.52
CCDC62Q6P9F0 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC62Q6P9F0 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC62Q6P9F0 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC62Q6P9F0 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC62Q6P9F0 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC62Q6P9F0 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CCDC62Q6P9F0 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC62Q6P9F0 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC18.29■□□□□ 0.52
CCDC62Q6P9F0 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC62Q6P9F0 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC62Q6P9F0 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC18.29■□□□□ 0.52
CCDC62Q6P9F0 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC62Q6P9F0 RNF216P1-203ENST00000404404 2427 ntBASIC18.29■□□□□ 0.52
CCDC62Q6P9F0 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC18.29■□□□□ 0.52
CCDC62Q6P9F0 LINC01144-201ENST00000626198 1710 ntBASIC18.29■□□□□ 0.52
CCDC62Q6P9F0 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
CCDC62Q6P9F0 PCDHA12-202ENST00000613593 2588 ntBASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms