Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
H3F3CQ6NXT2 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
H3F3CQ6NXT2 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
H3F3CQ6NXT2 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
H3F3CQ6NXT2 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
H3F3CQ6NXT2 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
H3F3CQ6NXT2 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.11■□□□□ 0.01
H3F3CQ6NXT2 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
H3F3CQ6NXT2 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
H3F3CQ6NXT2 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
H3F3CQ6NXT2 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
H3F3CQ6NXT2 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
H3F3CQ6NXT2 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.11■□□□□ 0.01
H3F3CQ6NXT2 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
H3F3CQ6NXT2 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
H3F3CQ6NXT2 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
H3F3CQ6NXT2 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
H3F3CQ6NXT2 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
H3F3CQ6NXT2 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
H3F3CQ6NXT2 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC15.11■□□□□ 0.01
H3F3CQ6NXT2 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC15.11■□□□□ 0.01
H3F3CQ6NXT2 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
H3F3CQ6NXT2 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
H3F3CQ6NXT2 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
H3F3CQ6NXT2 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
H3F3CQ6NXT2 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC15.11■□□□□ 0.01
H3F3CQ6NXT2 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC15.11■□□□□ 0.01
H3F3CQ6NXT2 AC004890.2-204ENST00000481968 304 ntBASIC15.11■□□□□ 0.01
H3F3CQ6NXT2 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
H3F3CQ6NXT2 AC027369.6-201ENST00000525520 931 ntBASIC15.11■□□□□ 0.01
H3F3CQ6NXT2 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
H3F3CQ6NXT2 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
H3F3CQ6NXT2 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
H3F3CQ6NXT2 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC15.11■□□□□ 0.01
H3F3CQ6NXT2 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC15.11■□□□□ 0.01
H3F3CQ6NXT2 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC15.11■□□□□ 0.01
H3F3CQ6NXT2 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
H3F3CQ6NXT2 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC15.11■□□□□ 0.01
H3F3CQ6NXT2 RN7SL828P-201ENST00000607615 303 ntBASIC15.11■□□□□ 0.01
H3F3CQ6NXT2 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.11■□□□□ 0.01
H3F3CQ6NXT2 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
H3F3CQ6NXT2 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
H3F3CQ6NXT2 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
H3F3CQ6NXT2 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
H3F3CQ6NXT2 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
H3F3CQ6NXT2 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
H3F3CQ6NXT2 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
H3F3CQ6NXT2 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
H3F3CQ6NXT2 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
H3F3CQ6NXT2 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
H3F3CQ6NXT2 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
H3F3CQ6NXT2 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
H3F3CQ6NXT2 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC15.11■□□□□ 0.01
H3F3CQ6NXT2 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC15.11■□□□□ 0.01
H3F3CQ6NXT2 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
H3F3CQ6NXT2 AC005915.1-201ENST00000624912 2018 ntBASIC15.1■□□□□ 0.01
H3F3CQ6NXT2 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
H3F3CQ6NXT2 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
H3F3CQ6NXT2 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
H3F3CQ6NXT2 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC15.1■□□□□ 0.01
H3F3CQ6NXT2 AC100757.3-201ENST00000622361 1406 ntBASIC15.1■□□□□ 0.01
H3F3CQ6NXT2 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC15.1■□□□□ 0.01
H3F3CQ6NXT2 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
H3F3CQ6NXT2 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
H3F3CQ6NXT2 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
H3F3CQ6NXT2 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
H3F3CQ6NXT2 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
H3F3CQ6NXT2 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
H3F3CQ6NXT2 UBALD1-205ENST00000590891 2641 ntBASIC15.1■□□□□ 0.01
H3F3CQ6NXT2 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
H3F3CQ6NXT2 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.1■□□□□ 0.01
H3F3CQ6NXT2 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15.1■□□□□ 0.01
H3F3CQ6NXT2 KLK8-202ENST00000320838 456 ntTSL 5 BASIC15.1■□□□□ 0.01
H3F3CQ6NXT2 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
H3F3CQ6NXT2 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC15.1■□□□□ 0.01
H3F3CQ6NXT2 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC15.1■□□□□ 0.01
H3F3CQ6NXT2 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
H3F3CQ6NXT2 TSSK5P-201ENST00000423978 907 ntBASIC15.1■□□□□ 0.01
H3F3CQ6NXT2 HNRNPA1P40-201ENST00000426371 1278 ntBASIC15.1■□□□□ 0.01
H3F3CQ6NXT2 AL512638.1-201ENST00000457493 794 ntBASIC15.1■□□□□ 0.01
H3F3CQ6NXT2 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
H3F3CQ6NXT2 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC15.1■□□□□ 0.01
H3F3CQ6NXT2 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC15.1■□□□□ 0.01
H3F3CQ6NXT2 BANF1P1-201ENST00000553684 263 ntBASIC15.1■□□□□ 0.01
H3F3CQ6NXT2 AC061975.2-201ENST00000581722 295 ntBASIC15.1■□□□□ 0.01
H3F3CQ6NXT2 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC15.1■□□□□ 0.01
H3F3CQ6NXT2 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC15.1■□□□□ 0.01
H3F3CQ6NXT2 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.1■□□□□ 0.01
H3F3CQ6NXT2 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.1■□□□□ 0.01
H3F3CQ6NXT2 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC15.1■□□□□ 0.01
H3F3CQ6NXT2 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
H3F3CQ6NXT2 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC15.1■□□□□ 0.01
H3F3CQ6NXT2 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
H3F3CQ6NXT2 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
H3F3CQ6NXT2 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC15.1■□□□□ 0.01
H3F3CQ6NXT2 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
H3F3CQ6NXT2 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
H3F3CQ6NXT2 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
H3F3CQ6NXT2 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
H3F3CQ6NXT2 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms