Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
LYSMD4Q5XG99 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LYSMD4Q5XG99 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC15.9■□□□□ 0.14
LYSMD4Q5XG99 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LYSMD4Q5XG99 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LYSMD4Q5XG99 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LYSMD4Q5XG99 PDIA3P1-201ENST00000471856 1510 ntBASIC15.9■□□□□ 0.14
LYSMD4Q5XG99 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LYSMD4Q5XG99 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC15.9■□□□□ 0.14
LYSMD4Q5XG99 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LYSMD4Q5XG99 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC15.9■□□□□ 0.14
LYSMD4Q5XG99 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC15.9■□□□□ 0.14
LYSMD4Q5XG99 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LYSMD4Q5XG99 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
LYSMD4Q5XG99 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC15.9■□□□□ 0.14
LYSMD4Q5XG99 NME6-203ENST00000415644 849 ntTSL 2 BASIC15.9■□□□□ 0.14
LYSMD4Q5XG99 AL442647.2-201ENST00000429864 857 ntBASIC15.9■□□□□ 0.14
LYSMD4Q5XG99 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC15.9■□□□□ 0.14
LYSMD4Q5XG99 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC15.9■□□□□ 0.14
LYSMD4Q5XG99 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC15.9■□□□□ 0.14
LYSMD4Q5XG99 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC15.9■□□□□ 0.14
LYSMD4Q5XG99 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC15.9■□□□□ 0.14
LYSMD4Q5XG99 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC15.9■□□□□ 0.14
LYSMD4Q5XG99 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
LYSMD4Q5XG99 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC15.9■□□□□ 0.14
LYSMD4Q5XG99 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC15.9■□□□□ 0.14
LYSMD4Q5XG99 WNT11-204ENST00000621122 789 ntTSL 5 BASIC15.9■□□□□ 0.14
LYSMD4Q5XG99 ABBA01031660.1-201ENST00000635219 756 ntBASIC15.9■□□□□ 0.14
LYSMD4Q5XG99 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC15.9■□□□□ 0.14
LYSMD4Q5XG99 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC15.9■□□□□ 0.14
LYSMD4Q5XG99 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC15.9■□□□□ 0.14
LYSMD4Q5XG99 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
LYSMD4Q5XG99 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
LYSMD4Q5XG99 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LYSMD4Q5XG99 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
LYSMD4Q5XG99 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC15.9■□□□□ 0.14
LYSMD4Q5XG99 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
LYSMD4Q5XG99 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
LYSMD4Q5XG99 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LYSMD4Q5XG99 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LYSMD4Q5XG99 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
LYSMD4Q5XG99 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC15.9■□□□□ 0.14
LYSMD4Q5XG99 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
LYSMD4Q5XG99 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
LYSMD4Q5XG99 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
LYSMD4Q5XG99 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LYSMD4Q5XG99 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LYSMD4Q5XG99 AC006538.1-201ENST00000567905 1585 ntBASIC15.89■□□□□ 0.13
LYSMD4Q5XG99 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
LYSMD4Q5XG99 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LYSMD4Q5XG99 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LYSMD4Q5XG99 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LYSMD4Q5XG99 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC15.89■□□□□ 0.13
LYSMD4Q5XG99 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC15.89■□□□□ 0.13
LYSMD4Q5XG99 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC15.89■□□□□ 0.13
LYSMD4Q5XG99 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC15.89■□□□□ 0.13
LYSMD4Q5XG99 LINC01115-203ENST00000606068 577 ntBASIC15.89■□□□□ 0.13
LYSMD4Q5XG99 AL022328.1-201ENST00000610050 478 ntBASIC15.89■□□□□ 0.13
LYSMD4Q5XG99 RPSAP52-203ENST00000622976 1023 ntBASIC15.89■□□□□ 0.13
LYSMD4Q5XG99 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
LYSMD4Q5XG99 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LYSMD4Q5XG99 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
LYSMD4Q5XG99 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.89■□□□□ 0.13
LYSMD4Q5XG99 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC15.89■□□□□ 0.13
LYSMD4Q5XG99 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.89■□□□□ 0.13
LYSMD4Q5XG99 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
LYSMD4Q5XG99 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.89■□□□□ 0.13
LYSMD4Q5XG99 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
LYSMD4Q5XG99 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
LYSMD4Q5XG99 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LYSMD4Q5XG99 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LYSMD4Q5XG99 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC15.88■□□□□ 0.13
LYSMD4Q5XG99 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LYSMD4Q5XG99 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
LYSMD4Q5XG99 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LYSMD4Q5XG99 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LYSMD4Q5XG99 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LYSMD4Q5XG99 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LYSMD4Q5XG99 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LYSMD4Q5XG99 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
LYSMD4Q5XG99 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
LYSMD4Q5XG99 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
LYSMD4Q5XG99 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
LYSMD4Q5XG99 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC15.88■□□□□ 0.13
LYSMD4Q5XG99 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC15.88■□□□□ 0.13
LYSMD4Q5XG99 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LYSMD4Q5XG99 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
LYSMD4Q5XG99 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LYSMD4Q5XG99 APOC3-202ENST00000375345 604 ntTSL 5 BASIC15.88■□□□□ 0.13
LYSMD4Q5XG99 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
LYSMD4Q5XG99 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
LYSMD4Q5XG99 TDH-203ENST00000531764 1110 ntBASIC15.88■□□□□ 0.13
LYSMD4Q5XG99 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC15.88■□□□□ 0.13
LYSMD4Q5XG99 MIR5189-201ENST00000577370 114 ntBASIC15.88■□□□□ 0.13
LYSMD4Q5XG99 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC15.88■□□□□ 0.13
LYSMD4Q5XG99 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC15.88■□□□□ 0.13
LYSMD4Q5XG99 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC15.88■□□□□ 0.13
LYSMD4Q5XG99 SNX12-206ENST00000622259 661 ntTSL 5 BASIC15.88■□□□□ 0.13
LYSMD4Q5XG99 AL158212.4-201ENST00000624062 1286 ntBASIC15.88■□□□□ 0.13
LYSMD4Q5XG99 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms