Protein–RNA interactions for Protein: Q5VV42

CDKAL1, Threonylcarbamoyladenosine tRNA methylthiotransferase, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1Q5VV42 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDKAL1Q5VV42 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC17.86■□□□□ 0.45
CDKAL1Q5VV42 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
CDKAL1Q5VV42 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDKAL1Q5VV42 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDKAL1Q5VV42 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDKAL1Q5VV42 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CDKAL1Q5VV42 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDKAL1Q5VV42 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDKAL1Q5VV42 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDKAL1Q5VV42 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC17.85■□□□□ 0.45
CDKAL1Q5VV42 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.85■□□□□ 0.45
CDKAL1Q5VV42 KRT18P34-201ENST00000488218 1270 ntBASIC17.85■□□□□ 0.45
CDKAL1Q5VV42 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CDKAL1Q5VV42 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC17.85■□□□□ 0.45
CDKAL1Q5VV42 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.85■□□□□ 0.45
CDKAL1Q5VV42 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CDKAL1Q5VV42 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
CDKAL1Q5VV42 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.85■□□□□ 0.45
CDKAL1Q5VV42 AC116407.3-201ENST00000623905 1129 ntBASIC17.85■□□□□ 0.45
CDKAL1Q5VV42 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDKAL1Q5VV42 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
CDKAL1Q5VV42 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC17.85■□□□□ 0.45
CDKAL1Q5VV42 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
CDKAL1Q5VV42 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CDKAL1Q5VV42 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDKAL1Q5VV42 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
CDKAL1Q5VV42 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
CDKAL1Q5VV42 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDKAL1Q5VV42 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDKAL1Q5VV42 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC17.84■□□□□ 0.45
CDKAL1Q5VV42 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDKAL1Q5VV42 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDKAL1Q5VV42 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC17.84■□□□□ 0.45
CDKAL1Q5VV42 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC17.84■□□□□ 0.45
CDKAL1Q5VV42 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC17.84■□□□□ 0.45
CDKAL1Q5VV42 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
CDKAL1Q5VV42 AC006058.4-201ENST00000624016 1670 ntBASIC17.84■□□□□ 0.45
CDKAL1Q5VV42 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDKAL1Q5VV42 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC17.84■□□□□ 0.45
CDKAL1Q5VV42 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CDKAL1Q5VV42 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CDKAL1Q5VV42 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.84■□□□□ 0.45
CDKAL1Q5VV42 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.84■□□□□ 0.45
CDKAL1Q5VV42 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC17.84■□□□□ 0.45
CDKAL1Q5VV42 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDKAL1Q5VV42 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDKAL1Q5VV42 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDKAL1Q5VV42 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.84■□□□□ 0.45
CDKAL1Q5VV42 CRYGEP-201ENST00000412192 528 ntBASIC17.84■□□□□ 0.45
CDKAL1Q5VV42 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.84■□□□□ 0.45
CDKAL1Q5VV42 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.84■□□□□ 0.45
CDKAL1Q5VV42 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CDKAL1Q5VV42 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDKAL1Q5VV42 IGHV3-22-201ENST00000520721 359 ntBASIC17.84■□□□□ 0.45
CDKAL1Q5VV42 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.84■□□□□ 0.45
CDKAL1Q5VV42 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CDKAL1Q5VV42 AC002347.1-201ENST00000569543 541 ntBASIC17.84■□□□□ 0.45
CDKAL1Q5VV42 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.84■□□□□ 0.45
CDKAL1Q5VV42 CD7-202ENST00000578509 925 ntTSL 3 BASIC17.84■□□□□ 0.45
CDKAL1Q5VV42 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.84■□□□□ 0.45
CDKAL1Q5VV42 MIR4321-201ENST00000592276 80 ntBASIC17.84■□□□□ 0.45
CDKAL1Q5VV42 GSN-206ENST00000394353 2311 ntTSL 2 BASIC17.84■□□□□ 0.45
CDKAL1Q5VV42 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDKAL1Q5VV42 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDKAL1Q5VV42 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC17.84■□□□□ 0.45
CDKAL1Q5VV42 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDKAL1Q5VV42 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDKAL1Q5VV42 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDKAL1Q5VV42 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC17.84■□□□□ 0.45
CDKAL1Q5VV42 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDKAL1Q5VV42 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDKAL1Q5VV42 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDKAL1Q5VV42 CICP13-201ENST00000422015 2789 ntBASIC17.84■□□□□ 0.45
CDKAL1Q5VV42 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CDKAL1Q5VV42 TMBIM7P-203ENST00000641617 1718 ntBASIC17.84■□□□□ 0.45
CDKAL1Q5VV42 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CDKAL1Q5VV42 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CDKAL1Q5VV42 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.83■□□□□ 0.45
CDKAL1Q5VV42 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC17.83■□□□□ 0.45
CDKAL1Q5VV42 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
CDKAL1Q5VV42 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC17.83■□□□□ 0.45
CDKAL1Q5VV42 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
CDKAL1Q5VV42 AC023157.3-201ENST00000619086 2088 ntBASIC17.83■□□□□ 0.45
CDKAL1Q5VV42 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC17.83■□□□□ 0.45
CDKAL1Q5VV42 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDKAL1Q5VV42 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDKAL1Q5VV42 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC17.83■□□□□ 0.44
CDKAL1Q5VV42 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CDKAL1Q5VV42 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.83■□□□□ 0.44
CDKAL1Q5VV42 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.83■□□□□ 0.44
CDKAL1Q5VV42 AC140658.5-201ENST00000438532 169 ntBASIC17.83■□□□□ 0.44
CDKAL1Q5VV42 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.83■□□□□ 0.44
CDKAL1Q5VV42 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.83■□□□□ 0.44
CDKAL1Q5VV42 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.83■□□□□ 0.44
CDKAL1Q5VV42 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
CDKAL1Q5VV42 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.83■□□□□ 0.44
CDKAL1Q5VV42 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.83■□□□□ 0.44
CDKAL1Q5VV42 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC17.83■□□□□ 0.44
CDKAL1Q5VV42 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms