Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC19.54■□□□□ 0.72
RNF20Q5VTR2 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC19.54■□□□□ 0.72
RNF20Q5VTR2 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
RNF20Q5VTR2 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC19.54■□□□□ 0.72
RNF20Q5VTR2 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC19.54■□□□□ 0.72
RNF20Q5VTR2 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RNF20Q5VTR2 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC19.54■□□□□ 0.72
RNF20Q5VTR2 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC19.54■□□□□ 0.72
RNF20Q5VTR2 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF20Q5VTR2 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF20Q5VTR2 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC19.54■□□□□ 0.72
RNF20Q5VTR2 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF20Q5VTR2 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC19.54■□□□□ 0.72
RNF20Q5VTR2 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
RNF20Q5VTR2 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF20Q5VTR2 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RNF20Q5VTR2 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF20Q5VTR2 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC19.54■□□□□ 0.72
RNF20Q5VTR2 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF20Q5VTR2 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC19.54■□□□□ 0.72
RNF20Q5VTR2 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
RNF20Q5VTR2 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
RNF20Q5VTR2 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
RNF20Q5VTR2 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC19.53■□□□□ 0.72
RNF20Q5VTR2 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC19.53■□□□□ 0.72
RNF20Q5VTR2 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
RNF20Q5VTR2 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
RNF20Q5VTR2 NEK7-201ENST00000367383 586 ntTSL 2 BASIC19.53■□□□□ 0.72
RNF20Q5VTR2 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RNF20Q5VTR2 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC19.53■□□□□ 0.72
RNF20Q5VTR2 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC19.53■□□□□ 0.72
RNF20Q5VTR2 PRYP6-201ENST00000514804 343 ntBASIC19.53■□□□□ 0.72
RNF20Q5VTR2 KRT18P58-201ENST00000527480 1120 ntBASIC19.53■□□□□ 0.72
RNF20Q5VTR2 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC19.53■□□□□ 0.72
RNF20Q5VTR2 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC19.53■□□□□ 0.72
RNF20Q5VTR2 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC19.53■□□□□ 0.72
RNF20Q5VTR2 AL603832.2-201ENST00000566195 2125 ntBASIC19.53■□□□□ 0.72
RNF20Q5VTR2 RARRES2P8-201ENST00000566335 367 ntBASIC19.53■□□□□ 0.72
RNF20Q5VTR2 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC19.53■□□□□ 0.72
RNF20Q5VTR2 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RNF20Q5VTR2 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC19.53■□□□□ 0.72
RNF20Q5VTR2 LINC02199-201ENST00000506655 2702 ntBASIC19.53■□□□□ 0.72
RNF20Q5VTR2 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC19.53■□□□□ 0.72
RNF20Q5VTR2 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
RNF20Q5VTR2 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
RNF20Q5VTR2 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
RNF20Q5VTR2 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RNF20Q5VTR2 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC19.53■□□□□ 0.72
RNF20Q5VTR2 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
RNF20Q5VTR2 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
RNF20Q5VTR2 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC19.52■□□□□ 0.72
RNF20Q5VTR2 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RNF20Q5VTR2 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RNF20Q5VTR2 AL365203.3-201ENST00000609742 2057 ntBASIC19.52■□□□□ 0.72
RNF20Q5VTR2 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
RNF20Q5VTR2 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC19.52■□□□□ 0.72
RNF20Q5VTR2 MST1L-201ENST00000442552 2185 ntBASIC19.52■□□□□ 0.72
RNF20Q5VTR2 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
RNF20Q5VTR2 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
RNF20Q5VTR2 AC024909.3-201ENST00000611513 2257 ntBASIC19.52■□□□□ 0.72
RNF20Q5VTR2 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
RNF20Q5VTR2 AL022342.1-201ENST00000400363 863 ntBASIC19.52■□□□□ 0.72
RNF20Q5VTR2 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC19.52■□□□□ 0.72
RNF20Q5VTR2 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC19.52■□□□□ 0.72
RNF20Q5VTR2 AC099522.2-201ENST00000607001 744 ntBASIC19.52■□□□□ 0.72
RNF20Q5VTR2 AL365330.1-201ENST00000607459 531 ntBASIC19.52■□□□□ 0.72
RNF20Q5VTR2 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RNF20Q5VTR2 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
RNF20Q5VTR2 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
RNF20Q5VTR2 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
RNF20Q5VTR2 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RNF20Q5VTR2 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.71
RNF20Q5VTR2 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC19.52■□□□□ 0.71
RNF20Q5VTR2 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC19.52■□□□□ 0.71
RNF20Q5VTR2 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
RNF20Q5VTR2 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC19.52■□□□□ 0.71
RNF20Q5VTR2 CICP6-201ENST00000457191 2729 ntBASIC19.52■□□□□ 0.71
RNF20Q5VTR2 PGR-209ENST00000617858 2816 ntTSL 5 BASIC19.52■□□□□ 0.71
RNF20Q5VTR2 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
RNF20Q5VTR2 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
RNF20Q5VTR2 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF20Q5VTR2 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC19.51■□□□□ 0.71
RNF20Q5VTR2 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RNF20Q5VTR2 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
RNF20Q5VTR2 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
RNF20Q5VTR2 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RNF20Q5VTR2 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF20Q5VTR2 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RNF20Q5VTR2 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC19.51■□□□□ 0.71
RNF20Q5VTR2 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF20Q5VTR2 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
RNF20Q5VTR2 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RNF20Q5VTR2 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC19.51■□□□□ 0.71
RNF20Q5VTR2 MIR940-201ENST00000401276 94 ntBASIC19.51■□□□□ 0.71
RNF20Q5VTR2 AC023274.1-201ENST00000418278 595 ntBASIC19.51■□□□□ 0.71
RNF20Q5VTR2 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RNF20Q5VTR2 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RNF20Q5VTR2 NMU-202ENST00000505262 693 ntTSL 3 BASIC19.51■□□□□ 0.71
RNF20Q5VTR2 AC002347.1-201ENST00000569543 541 ntBASIC19.51■□□□□ 0.71
RNF20Q5VTR2 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms