Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
VPS13DQ5THJ4 AL607033.1-201ENST00000623900 1599 ntBASIC10.76□□□□□ -0.69
VPS13DQ5THJ4 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
VPS13DQ5THJ4 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
VPS13DQ5THJ4 HADH-212ENST00000638621 741 ntTSL 5 BASIC10.76□□□□□ -0.69
VPS13DQ5THJ4 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC10.76□□□□□ -0.69
VPS13DQ5THJ4 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
VPS13DQ5THJ4 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
VPS13DQ5THJ4 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
VPS13DQ5THJ4 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
VPS13DQ5THJ4 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
VPS13DQ5THJ4 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC10.76□□□□□ -0.69
VPS13DQ5THJ4 AGER-203ENST00000375065 665 ntTSL 2 BASIC10.76□□□□□ -0.69
VPS13DQ5THJ4 GOLGA2P4-201ENST00000441462 777 ntBASIC10.76□□□□□ -0.69
VPS13DQ5THJ4 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC10.76□□□□□ -0.69
VPS13DQ5THJ4 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC10.76□□□□□ -0.69
VPS13DQ5THJ4 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
VPS13DQ5THJ4 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC10.76□□□□□ -0.69
VPS13DQ5THJ4 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC10.76□□□□□ -0.69
VPS13DQ5THJ4 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
VPS13DQ5THJ4 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
VPS13DQ5THJ4 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
VPS13DQ5THJ4 FO393414.2-201ENST00000405153 598 ntBASIC10.76□□□□□ -0.69
VPS13DQ5THJ4 AC245100.5-201ENST00000452108 331 ntBASIC10.76□□□□□ -0.69
VPS13DQ5THJ4 HIST2H2BC-201ENST00000498492 580 ntBASIC10.76□□□□□ -0.69
VPS13DQ5THJ4 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
VPS13DQ5THJ4 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC10.76□□□□□ -0.69
VPS13DQ5THJ4 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
VPS13DQ5THJ4 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
VPS13DQ5THJ4 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
VPS13DQ5THJ4 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
VPS13DQ5THJ4 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.69
VPS13DQ5THJ4 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC10.75□□□□□ -0.69
VPS13DQ5THJ4 LOX-206ENST00000639739 1626 ntTSL 5 BASIC10.75□□□□□ -0.69
VPS13DQ5THJ4 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC10.75□□□□□ -0.69
VPS13DQ5THJ4 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
VPS13DQ5THJ4 FAM197Y7-201ENST00000432892 766 ntBASIC10.75□□□□□ -0.69
VPS13DQ5THJ4 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC10.75□□□□□ -0.69
VPS13DQ5THJ4 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
VPS13DQ5THJ4 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC10.75□□□□□ -0.69
VPS13DQ5THJ4 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.69
VPS13DQ5THJ4 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
VPS13DQ5THJ4 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC10.75□□□□□ -0.69
VPS13DQ5THJ4 AL691432.1-201ENST00000596308 1422 ntBASIC10.75□□□□□ -0.69
VPS13DQ5THJ4 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
VPS13DQ5THJ4 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
VPS13DQ5THJ4 AC018735.1-201ENST00000437208 1502 ntBASIC10.75□□□□□ -0.69
VPS13DQ5THJ4 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
VPS13DQ5THJ4 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
VPS13DQ5THJ4 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC10.75□□□□□ -0.69
VPS13DQ5THJ4 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
VPS13DQ5THJ4 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
VPS13DQ5THJ4 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
VPS13DQ5THJ4 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
VPS13DQ5THJ4 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
VPS13DQ5THJ4 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC10.75□□□□□ -0.69
VPS13DQ5THJ4 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC10.75□□□□□ -0.69
VPS13DQ5THJ4 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC10.75□□□□□ -0.69
VPS13DQ5THJ4 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
VPS13DQ5THJ4 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC10.75□□□□□ -0.69
VPS13DQ5THJ4 AC018470.1-201ENST00000624790 3129 ntBASIC10.75□□□□□ -0.69
VPS13DQ5THJ4 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
VPS13DQ5THJ4 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
VPS13DQ5THJ4 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
VPS13DQ5THJ4 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
VPS13DQ5THJ4 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
VPS13DQ5THJ4 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
VPS13DQ5THJ4 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
VPS13DQ5THJ4 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
VPS13DQ5THJ4 TEX30-203ENST00000376022 828 ntTSL 2 BASIC10.75□□□□□ -0.69
VPS13DQ5THJ4 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
VPS13DQ5THJ4 MTX1P1-201ENST00000440904 838 ntBASIC10.75□□□□□ -0.69
VPS13DQ5THJ4 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
VPS13DQ5THJ4 LARP4-220ENST00000615080 856 ntTSL 5 BASIC10.75□□□□□ -0.69
VPS13DQ5THJ4 AC138951.2-201ENST00000623455 1161 ntBASIC10.75□□□□□ -0.69
VPS13DQ5THJ4 AC138627.1-207ENST00000641560 1006 ntBASIC10.75□□□□□ -0.69
VPS13DQ5THJ4 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
VPS13DQ5THJ4 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
VPS13DQ5THJ4 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.69
VPS13DQ5THJ4 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
VPS13DQ5THJ4 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
VPS13DQ5THJ4 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
VPS13DQ5THJ4 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
VPS13DQ5THJ4 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
VPS13DQ5THJ4 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC10.75□□□□□ -0.69
VPS13DQ5THJ4 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC10.75□□□□□ -0.69
VPS13DQ5THJ4 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
VPS13DQ5THJ4 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
VPS13DQ5THJ4 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
VPS13DQ5THJ4 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
VPS13DQ5THJ4 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC10.74□□□□□ -0.69
VPS13DQ5THJ4 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC10.74□□□□□ -0.69
VPS13DQ5THJ4 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
VPS13DQ5THJ4 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
VPS13DQ5THJ4 ZBTB45P2-201ENST00000452245 1531 ntBASIC10.74□□□□□ -0.69
VPS13DQ5THJ4 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC10.74□□□□□ -0.69
VPS13DQ5THJ4 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
VPS13DQ5THJ4 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC10.74□□□□□ -0.69
VPS13DQ5THJ4 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC10.74□□□□□ -0.69
VPS13DQ5THJ4 RN7SL48P-201ENST00000579283 293 ntBASIC10.74□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 155.6 ms