Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
RFX7Q2KHR2 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RFX7Q2KHR2 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
RFX7Q2KHR2 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC19.63■□□□□ 0.73
RFX7Q2KHR2 GOLGA6L11P-201ENST00000417252 1298 ntBASIC19.63■□□□□ 0.73
RFX7Q2KHR2 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC19.63■□□□□ 0.73
RFX7Q2KHR2 WBP2-203ENST00000433525 928 ntTSL 2 BASIC19.63■□□□□ 0.73
RFX7Q2KHR2 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC19.63■□□□□ 0.73
RFX7Q2KHR2 AC027369.6-201ENST00000525520 931 ntBASIC19.63■□□□□ 0.73
RFX7Q2KHR2 RBM7-207ENST00000544582 692 ntTSL 3 BASIC19.63■□□□□ 0.73
RFX7Q2KHR2 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
RFX7Q2KHR2 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RFX7Q2KHR2 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC19.63■□□□□ 0.73
RFX7Q2KHR2 SPDYE22P-201ENST00000582158 798 ntBASIC19.63■□□□□ 0.73
RFX7Q2KHR2 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RFX7Q2KHR2 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC19.63■□□□□ 0.73
RFX7Q2KHR2 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC19.63■□□□□ 0.73
RFX7Q2KHR2 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC19.63■□□□□ 0.73
RFX7Q2KHR2 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RFX7Q2KHR2 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RFX7Q2KHR2 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC19.63■□□□□ 0.73
RFX7Q2KHR2 AC069224.1-201ENST00000566372 1715 ntBASIC19.63■□□□□ 0.73
RFX7Q2KHR2 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RFX7Q2KHR2 BLK-205ENST00000529894 2017 ntTSL 5 BASIC19.63■□□□□ 0.73
RFX7Q2KHR2 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RFX7Q2KHR2 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC19.63■□□□□ 0.73
RFX7Q2KHR2 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RFX7Q2KHR2 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC19.63■□□□□ 0.73
RFX7Q2KHR2 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RFX7Q2KHR2 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RFX7Q2KHR2 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
RFX7Q2KHR2 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RFX7Q2KHR2 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC19.62■□□□□ 0.73
RFX7Q2KHR2 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
RFX7Q2KHR2 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RFX7Q2KHR2 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC19.62■□□□□ 0.73
RFX7Q2KHR2 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RFX7Q2KHR2 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RFX7Q2KHR2 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC19.62■□□□□ 0.73
RFX7Q2KHR2 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RFX7Q2KHR2 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RFX7Q2KHR2 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RFX7Q2KHR2 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RFX7Q2KHR2 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC19.62■□□□□ 0.73
RFX7Q2KHR2 AL035456.1-201ENST00000456064 1369 ntBASIC19.62■□□□□ 0.73
RFX7Q2KHR2 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RFX7Q2KHR2 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RFX7Q2KHR2 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RFX7Q2KHR2 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RFX7Q2KHR2 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RFX7Q2KHR2 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RFX7Q2KHR2 SPTLC1P1-201ENST00000447199 261 ntBASIC19.62■□□□□ 0.73
RFX7Q2KHR2 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RFX7Q2KHR2 AC005225.4-201ENST00000557330 545 ntBASIC19.62■□□□□ 0.73
RFX7Q2KHR2 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC19.62■□□□□ 0.73
RFX7Q2KHR2 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC19.62■□□□□ 0.73
RFX7Q2KHR2 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
RFX7Q2KHR2 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RFX7Q2KHR2 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RFX7Q2KHR2 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RFX7Q2KHR2 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC19.62■□□□□ 0.73
RFX7Q2KHR2 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC19.62■□□□□ 0.73
RFX7Q2KHR2 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RFX7Q2KHR2 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RFX7Q2KHR2 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC19.61■□□□□ 0.73
RFX7Q2KHR2 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RFX7Q2KHR2 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC19.61■□□□□ 0.73
RFX7Q2KHR2 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC19.61■□□□□ 0.73
RFX7Q2KHR2 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC19.61■□□□□ 0.73
RFX7Q2KHR2 HAUS4P1-201ENST00000406739 1145 ntBASIC19.61■□□□□ 0.73
RFX7Q2KHR2 AL353705.2-201ENST00000428243 662 ntBASIC19.61■□□□□ 0.73
RFX7Q2KHR2 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC19.61■□□□□ 0.73
RFX7Q2KHR2 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC19.61■□□□□ 0.73
RFX7Q2KHR2 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC19.61■□□□□ 0.73
RFX7Q2KHR2 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC19.61■□□□□ 0.73
RFX7Q2KHR2 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RFX7Q2KHR2 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC19.61■□□□□ 0.73
RFX7Q2KHR2 LITAF-210ENST00000571976 548 ntTSL 2 BASIC19.61■□□□□ 0.73
RFX7Q2KHR2 LITAF-214ENST00000574703 486 ntTSL 2 BASIC19.61■□□□□ 0.73
RFX7Q2KHR2 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC19.61■□□□□ 0.73
RFX7Q2KHR2 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RFX7Q2KHR2 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RFX7Q2KHR2 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
RFX7Q2KHR2 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
RFX7Q2KHR2 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
RFX7Q2KHR2 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
RFX7Q2KHR2 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC19.61■□□□□ 0.73
RFX7Q2KHR2 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RFX7Q2KHR2 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RFX7Q2KHR2 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC19.61■□□□□ 0.73
RFX7Q2KHR2 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
RFX7Q2KHR2 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
RFX7Q2KHR2 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
RFX7Q2KHR2 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RFX7Q2KHR2 AL603832.2-201ENST00000566195 2125 ntBASIC19.61■□□□□ 0.73
RFX7Q2KHR2 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
RFX7Q2KHR2 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC19.61■□□□□ 0.73
RFX7Q2KHR2 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
RFX7Q2KHR2 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RFX7Q2KHR2 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms