Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
PDS5AQ29RF7 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
PDS5AQ29RF7 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC19.42■□□□□ 0.7
PDS5AQ29RF7 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC19.42■□□□□ 0.7
PDS5AQ29RF7 AC092171.3-201ENST00000610122 2651 ntBASIC19.41■□□□□ 0.7
PDS5AQ29RF7 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PDS5AQ29RF7 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDS5AQ29RF7 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDS5AQ29RF7 ZBTB45P2-201ENST00000452245 1531 ntBASIC19.41■□□□□ 0.7
PDS5AQ29RF7 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDS5AQ29RF7 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDS5AQ29RF7 BNIP3P1-202ENST00000550043 1585 ntBASIC19.41■□□□□ 0.7
PDS5AQ29RF7 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PDS5AQ29RF7 AC005052.1-201ENST00000625181 2492 ntBASIC19.41■□□□□ 0.7
PDS5AQ29RF7 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PDS5AQ29RF7 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDS5AQ29RF7 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDS5AQ29RF7 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC19.41■□□□□ 0.7
PDS5AQ29RF7 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
PDS5AQ29RF7 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDS5AQ29RF7 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDS5AQ29RF7 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC19.41■□□□□ 0.7
PDS5AQ29RF7 HAUS4P1-201ENST00000406739 1145 ntBASIC19.41■□□□□ 0.7
PDS5AQ29RF7 AZGP1P1-201ENST00000411909 902 ntBASIC19.41■□□□□ 0.7
PDS5AQ29RF7 COX5BP8-201ENST00000416911 349 ntBASIC19.41■□□□□ 0.7
PDS5AQ29RF7 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC19.41■□□□□ 0.7
PDS5AQ29RF7 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC19.41■□□□□ 0.7
PDS5AQ29RF7 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDS5AQ29RF7 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDS5AQ29RF7 AC063926.2-201ENST00000623766 1308 ntBASIC19.41■□□□□ 0.7
PDS5AQ29RF7 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PDS5AQ29RF7 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC19.41■□□□□ 0.7
PDS5AQ29RF7 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PDS5AQ29RF7 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
PDS5AQ29RF7 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PDS5AQ29RF7 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC19.4■□□□□ 0.7
PDS5AQ29RF7 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PDS5AQ29RF7 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC19.4■□□□□ 0.7
PDS5AQ29RF7 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PDS5AQ29RF7 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PDS5AQ29RF7 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC19.4■□□□□ 0.7
PDS5AQ29RF7 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC19.4■□□□□ 0.7
PDS5AQ29RF7 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC19.4■□□□□ 0.7
PDS5AQ29RF7 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC19.4■□□□□ 0.7
PDS5AQ29RF7 RN7SL692P-201ENST00000464677 288 ntBASIC19.4■□□□□ 0.7
PDS5AQ29RF7 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC19.4■□□□□ 0.7
PDS5AQ29RF7 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC19.4■□□□□ 0.7
PDS5AQ29RF7 CFL1-212ENST00000531413 636 ntTSL 3 BASIC19.4■□□□□ 0.7
PDS5AQ29RF7 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC19.4■□□□□ 0.7
PDS5AQ29RF7 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC19.4■□□□□ 0.7
PDS5AQ29RF7 RRP7BP-205ENST00000566851 833 ntBASIC19.4■□□□□ 0.7
PDS5AQ29RF7 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC19.4■□□□□ 0.7
PDS5AQ29RF7 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC19.4■□□□□ 0.7
PDS5AQ29RF7 AL391069.4-201ENST00000609583 481 ntBASIC19.4■□□□□ 0.7
PDS5AQ29RF7 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC19.4■□□□□ 0.7
PDS5AQ29RF7 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC19.4■□□□□ 0.7
PDS5AQ29RF7 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PDS5AQ29RF7 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC19.4■□□□□ 0.7
PDS5AQ29RF7 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PDS5AQ29RF7 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PDS5AQ29RF7 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
PDS5AQ29RF7 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.7
PDS5AQ29RF7 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.7
PDS5AQ29RF7 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
PDS5AQ29RF7 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
PDS5AQ29RF7 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PDS5AQ29RF7 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDS5AQ29RF7 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDS5AQ29RF7 AC011676.5-201ENST00000624864 2660 ntBASIC19.39■□□□□ 0.69
PDS5AQ29RF7 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PDS5AQ29RF7 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
PDS5AQ29RF7 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDS5AQ29RF7 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDS5AQ29RF7 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDS5AQ29RF7 NME2P1-201ENST00000426182 414 ntBASIC19.39■□□□□ 0.69
PDS5AQ29RF7 AC005034.1-201ENST00000426657 489 ntBASIC19.39■□□□□ 0.69
PDS5AQ29RF7 RPL13P2-201ENST00000440687 659 ntBASIC19.39■□□□□ 0.69
PDS5AQ29RF7 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC19.39■□□□□ 0.69
PDS5AQ29RF7 CD81-207ENST00000481687 890 ntTSL 2 BASIC19.39■□□□□ 0.69
PDS5AQ29RF7 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC19.39■□□□□ 0.69
PDS5AQ29RF7 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PDS5AQ29RF7 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC19.39■□□□□ 0.69
PDS5AQ29RF7 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC19.39■□□□□ 0.69
PDS5AQ29RF7 SRP9-204ENST00000619790 377 ntTSL 2 BASIC19.39■□□□□ 0.69
PDS5AQ29RF7 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
PDS5AQ29RF7 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC19.39■□□□□ 0.69
PDS5AQ29RF7 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDS5AQ29RF7 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PDS5AQ29RF7 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDS5AQ29RF7 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDS5AQ29RF7 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PDS5AQ29RF7 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDS5AQ29RF7 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PDS5AQ29RF7 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
PDS5AQ29RF7 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDS5AQ29RF7 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC19.39■□□□□ 0.69
PDS5AQ29RF7 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC19.39■□□□□ 0.69
PDS5AQ29RF7 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PDS5AQ29RF7 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC19.38■□□□□ 0.69
PDS5AQ29RF7 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms