Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 GATB-205ENST00000508611 605 ntTSL 2 BASIC18.96■□□□□ 0.63
SSRP1Q08945 AC105233.2-201ENST00000523697 349 ntBASIC18.96■□□□□ 0.63
SSRP1Q08945 AF228730.5-201ENST00000530288 346 ntBASIC18.96■□□□□ 0.63
SSRP1Q08945 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC18.96■□□□□ 0.63
SSRP1Q08945 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC18.96■□□□□ 0.63
SSRP1Q08945 MIR3687-2-201ENST00000577708 61 ntBASIC18.96■□□□□ 0.63
SSRP1Q08945 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC18.96■□□□□ 0.63
SSRP1Q08945 NKG7-205ENST00000600427 520 ntTSL 3 BASIC18.96■□□□□ 0.63
SSRP1Q08945 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC18.96■□□□□ 0.63
SSRP1Q08945 MIR3687-1-201ENST00000614492 61 ntBASIC18.96■□□□□ 0.63
SSRP1Q08945 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC18.96■□□□□ 0.63
SSRP1Q08945 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
SSRP1Q08945 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SSRP1Q08945 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
SSRP1Q08945 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SSRP1Q08945 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC18.96■□□□□ 0.63
SSRP1Q08945 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC18.96■□□□□ 0.63
SSRP1Q08945 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SSRP1Q08945 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC18.96■□□□□ 0.63
SSRP1Q08945 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
SSRP1Q08945 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SSRP1Q08945 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SSRP1Q08945 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC18.96■□□□□ 0.63
SSRP1Q08945 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC18.96■□□□□ 0.63
SSRP1Q08945 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SSRP1Q08945 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC18.96■□□□□ 0.63
SSRP1Q08945 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
SSRP1Q08945 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
SSRP1Q08945 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SSRP1Q08945 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SSRP1Q08945 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
SSRP1Q08945 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC18.95■□□□□ 0.62
SSRP1Q08945 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
SSRP1Q08945 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SSRP1Q08945 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC18.95■□□□□ 0.62
SSRP1Q08945 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC18.95■□□□□ 0.62
SSRP1Q08945 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC18.95■□□□□ 0.62
SSRP1Q08945 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC18.95■□□□□ 0.62
SSRP1Q08945 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC18.95■□□□□ 0.62
SSRP1Q08945 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SSRP1Q08945 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SSRP1Q08945 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SSRP1Q08945 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
SSRP1Q08945 AC112482.1-201ENST00000492080 688 ntBASIC18.95■□□□□ 0.62
SSRP1Q08945 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SSRP1Q08945 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC18.95■□□□□ 0.62
SSRP1Q08945 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC18.95■□□□□ 0.62
SSRP1Q08945 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC18.95■□□□□ 0.62
SSRP1Q08945 AC010327.4-202ENST00000591484 748 ntBASIC18.95■□□□□ 0.62
SSRP1Q08945 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
SSRP1Q08945 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SSRP1Q08945 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SSRP1Q08945 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SSRP1Q08945 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SSRP1Q08945 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC18.95■□□□□ 0.62
SSRP1Q08945 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC18.95■□□□□ 0.62
SSRP1Q08945 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
SSRP1Q08945 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SSRP1Q08945 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SSRP1Q08945 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC18.94■□□□□ 0.62
SSRP1Q08945 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
SSRP1Q08945 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
SSRP1Q08945 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
SSRP1Q08945 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.94■□□□□ 0.62
SSRP1Q08945 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SSRP1Q08945 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SSRP1Q08945 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC18.94■□□□□ 0.62
SSRP1Q08945 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC18.94■□□□□ 0.62
SSRP1Q08945 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SSRP1Q08945 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
SSRP1Q08945 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SSRP1Q08945 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SSRP1Q08945 SPCS2P4-201ENST00000436160 681 ntBASIC18.94■□□□□ 0.62
SSRP1Q08945 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC18.94■□□□□ 0.62
SSRP1Q08945 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC18.94■□□□□ 0.62
SSRP1Q08945 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC18.94■□□□□ 0.62
SSRP1Q08945 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
SSRP1Q08945 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC18.94■□□□□ 0.62
SSRP1Q08945 PUS1-205ENST00000535067 838 ntTSL 3 BASIC18.94■□□□□ 0.62
SSRP1Q08945 RNF34-208ENST00000555076 593 ntTSL 3 BASIC18.94■□□□□ 0.62
SSRP1Q08945 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC18.94■□□□□ 0.62
SSRP1Q08945 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC18.94■□□□□ 0.62
SSRP1Q08945 WDR88-203ENST00000592765 651 ntTSL 5 BASIC18.94■□□□□ 0.62
SSRP1Q08945 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC18.94■□□□□ 0.62
SSRP1Q08945 AL365330.1-201ENST00000607459 531 ntBASIC18.94■□□□□ 0.62
SSRP1Q08945 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC18.94■□□□□ 0.62
SSRP1Q08945 SPTSSB-204ENST00000617024 1292 ntBASIC18.94■□□□□ 0.62
SSRP1Q08945 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC18.94■□□□□ 0.62
SSRP1Q08945 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SSRP1Q08945 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SSRP1Q08945 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
SSRP1Q08945 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
SSRP1Q08945 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SSRP1Q08945 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC18.93■□□□□ 0.62
SSRP1Q08945 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC18.93■□□□□ 0.62
SSRP1Q08945 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SSRP1Q08945 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SSRP1Q08945 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
SSRP1Q08945 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
SSRP1Q08945 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms