Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC20.02■□□□□ 0.8
DDR1Q08345 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC20.02■□□□□ 0.8
DDR1Q08345 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
DDR1Q08345 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC20.02■□□□□ 0.8
DDR1Q08345 RHOQP1-201ENST00000555758 579 ntBASIC20.02■□□□□ 0.8
DDR1Q08345 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC20.02■□□□□ 0.8
DDR1Q08345 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
DDR1Q08345 AC120045.2-201ENST00000567334 178 ntBASIC20.02■□□□□ 0.8
DDR1Q08345 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC20.02■□□□□ 0.8
DDR1Q08345 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC20.02■□□□□ 0.8
DDR1Q08345 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
DDR1Q08345 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
DDR1Q08345 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
DDR1Q08345 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC20.02■□□□□ 0.8
DDR1Q08345 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
DDR1Q08345 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
DDR1Q08345 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
DDR1Q08345 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
DDR1Q08345 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
DDR1Q08345 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
DDR1Q08345 AC060834.1-201ENST00000443027 2032 ntBASIC20.02■□□□□ 0.79
DDR1Q08345 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC20.02■□□□□ 0.79
DDR1Q08345 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC20.02■□□□□ 0.79
DDR1Q08345 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
DDR1Q08345 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC20.01■□□□□ 0.79
DDR1Q08345 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
DDR1Q08345 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC20.01■□□□□ 0.79
DDR1Q08345 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
DDR1Q08345 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
DDR1Q08345 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
DDR1Q08345 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
DDR1Q08345 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC20.01■□□□□ 0.79
DDR1Q08345 AC004987.2-201ENST00000395959 1148 ntBASIC20.01■□□□□ 0.79
DDR1Q08345 BAATP1-201ENST00000412284 1225 ntBASIC20.01■□□□□ 0.79
DDR1Q08345 SOCS2P1-201ENST00000417727 557 ntBASIC20.01■□□□□ 0.79
DDR1Q08345 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC20.01■□□□□ 0.79
DDR1Q08345 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
DDR1Q08345 OLR1-203ENST00000432556 950 ntTSL 2 BASIC20.01■□□□□ 0.79
DDR1Q08345 KRT90P-201ENST00000549264 1064 ntBASIC20.01■□□□□ 0.79
DDR1Q08345 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC20.01■□□□□ 0.79
DDR1Q08345 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
DDR1Q08345 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
DDR1Q08345 AC005252.2-201ENST00000624630 1141 ntBASIC20.01■□□□□ 0.79
DDR1Q08345 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC20.01■□□□□ 0.79
DDR1Q08345 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
DDR1Q08345 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC20.01■□□□□ 0.79
DDR1Q08345 KRT8P37-201ENST00000451609 1420 ntBASIC20.01■□□□□ 0.79
DDR1Q08345 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC20.01■□□□□ 0.79
DDR1Q08345 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
DDR1Q08345 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC20.01■□□□□ 0.79
DDR1Q08345 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
DDR1Q08345 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
DDR1Q08345 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC20■□□□□ 0.79
DDR1Q08345 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC20■□□□□ 0.79
DDR1Q08345 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20■□□□□ 0.79
DDR1Q08345 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
DDR1Q08345 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC20■□□□□ 0.79
DDR1Q08345 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
DDR1Q08345 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC20■□□□□ 0.79
DDR1Q08345 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
DDR1Q08345 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
DDR1Q08345 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
DDR1Q08345 AC012441.1-201ENST00000446669 685 ntBASIC20■□□□□ 0.79
DDR1Q08345 VDAC1P7-201ENST00000462417 847 ntBASIC20■□□□□ 0.79
DDR1Q08345 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC20■□□□□ 0.79
DDR1Q08345 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC20■□□□□ 0.79
DDR1Q08345 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC20■□□□□ 0.79
DDR1Q08345 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC20■□□□□ 0.79
DDR1Q08345 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC20■□□□□ 0.79
DDR1Q08345 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC20■□□□□ 0.79
DDR1Q08345 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC20■□□□□ 0.79
DDR1Q08345 AL049840.4-201ENST00000602422 811 ntBASIC20■□□□□ 0.79
DDR1Q08345 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
DDR1Q08345 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC20■□□□□ 0.79
DDR1Q08345 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
DDR1Q08345 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC20■□□□□ 0.79
DDR1Q08345 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC20■□□□□ 0.79
DDR1Q08345 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
DDR1Q08345 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC20■□□□□ 0.79
DDR1Q08345 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
DDR1Q08345 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
DDR1Q08345 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC20■□□□□ 0.79
DDR1Q08345 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
DDR1Q08345 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
DDR1Q08345 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
DDR1Q08345 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
DDR1Q08345 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC19.99■□□□□ 0.79
DDR1Q08345 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC19.99■□□□□ 0.79
DDR1Q08345 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
DDR1Q08345 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
DDR1Q08345 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
DDR1Q08345 TPO-206ENST00000382269 1155 ntTSL 5 BASIC19.99■□□□□ 0.79
DDR1Q08345 TOMM22P5-201ENST00000416399 439 ntBASIC19.99■□□□□ 0.79
DDR1Q08345 AC093433.1-201ENST00000458048 571 ntBASIC19.99■□□□□ 0.79
DDR1Q08345 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC19.99■□□□□ 0.79
DDR1Q08345 FAM86HP-204ENST00000513466 959 ntBASIC19.99■□□□□ 0.79
DDR1Q08345 RNA5SP423-201ENST00000517127 109 ntBASIC19.99■□□□□ 0.79
DDR1Q08345 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC19.99■□□□□ 0.79
DDR1Q08345 RN7SL560P-201ENST00000577943 264 ntBASIC19.99■□□□□ 0.79
DDR1Q08345 GNRHR2-203ENST00000581100 1187 ntBASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms