Protein–RNA interactions for Protein: Q03692

COL10A1, Collagen alpha-1(X) chain, humanhuman

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL10A1Q03692 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
COL10A1Q03692 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC13.85□□□□□ -0.19
COL10A1Q03692 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC13.85□□□□□ -0.19
COL10A1Q03692 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
COL10A1Q03692 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
COL10A1Q03692 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
COL10A1Q03692 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
COL10A1Q03692 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC13.85□□□□□ -0.19
COL10A1Q03692 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC13.85□□□□□ -0.19
COL10A1Q03692 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
COL10A1Q03692 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
COL10A1Q03692 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC13.85□□□□□ -0.19
COL10A1Q03692 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
COL10A1Q03692 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
COL10A1Q03692 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
COL10A1Q03692 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
COL10A1Q03692 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC13.85□□□□□ -0.19
COL10A1Q03692 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
COL10A1Q03692 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
COL10A1Q03692 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
COL10A1Q03692 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
COL10A1Q03692 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
COL10A1Q03692 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
COL10A1Q03692 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
COL10A1Q03692 KRT18P3-201ENST00000451602 1288 ntBASIC13.85□□□□□ -0.19
COL10A1Q03692 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC13.85□□□□□ -0.19
COL10A1Q03692 POU5F1P6-201ENST00000466990 990 ntBASIC13.85□□□□□ -0.19
COL10A1Q03692 SMN2-210ENST00000511812 867 ntTSL 2 BASIC13.85□□□□□ -0.19
COL10A1Q03692 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC13.85□□□□□ -0.19
COL10A1Q03692 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
COL10A1Q03692 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC13.85□□□□□ -0.19
COL10A1Q03692 THTPA-204ENST00000554970 569 ntTSL 4 BASIC13.85□□□□□ -0.19
COL10A1Q03692 THTPA-206ENST00000556015 535 ntTSL 3 BASIC13.85□□□□□ -0.19
COL10A1Q03692 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC13.85□□□□□ -0.19
COL10A1Q03692 CD7-202ENST00000578509 925 ntTSL 3 BASIC13.85□□□□□ -0.19
COL10A1Q03692 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
COL10A1Q03692 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
COL10A1Q03692 AL009183.1-201ENST00000603760 355 ntBASIC13.85□□□□□ -0.19
COL10A1Q03692 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
COL10A1Q03692 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
COL10A1Q03692 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC13.85□□□□□ -0.19
COL10A1Q03692 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
COL10A1Q03692 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
COL10A1Q03692 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC13.85□□□□□ -0.19
COL10A1Q03692 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
COL10A1Q03692 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC13.85□□□□□ -0.19
COL10A1Q03692 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC13.85□□□□□ -0.19
COL10A1Q03692 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
COL10A1Q03692 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC13.85□□□□□ -0.19
COL10A1Q03692 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
COL10A1Q03692 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
COL10A1Q03692 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC13.85□□□□□ -0.19
COL10A1Q03692 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
COL10A1Q03692 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC13.85□□□□□ -0.19
COL10A1Q03692 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC13.85□□□□□ -0.19
COL10A1Q03692 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
COL10A1Q03692 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
COL10A1Q03692 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC13.84□□□□□ -0.19
COL10A1Q03692 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
COL10A1Q03692 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
COL10A1Q03692 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
COL10A1Q03692 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC13.84□□□□□ -0.19
COL10A1Q03692 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
COL10A1Q03692 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
COL10A1Q03692 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
COL10A1Q03692 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
COL10A1Q03692 AC007950.2-201ENST00000615045 2347 ntBASIC13.84□□□□□ -0.19
COL10A1Q03692 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
COL10A1Q03692 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
COL10A1Q03692 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
COL10A1Q03692 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
COL10A1Q03692 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
COL10A1Q03692 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
COL10A1Q03692 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
COL10A1Q03692 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC13.84□□□□□ -0.19
COL10A1Q03692 FIS1-203ENST00000442303 631 ntTSL 3 BASIC13.84□□□□□ -0.19
COL10A1Q03692 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC13.84□□□□□ -0.19
COL10A1Q03692 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC13.84□□□□□ -0.19
COL10A1Q03692 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC13.84□□□□□ -0.19
COL10A1Q03692 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC13.84□□□□□ -0.19
COL10A1Q03692 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC13.84□□□□□ -0.19
COL10A1Q03692 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
COL10A1Q03692 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC13.84□□□□□ -0.19
COL10A1Q03692 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC13.84□□□□□ -0.19
COL10A1Q03692 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC13.84□□□□□ -0.19
COL10A1Q03692 FAM197Y3-203ENST00000618346 717 ntBASIC13.84□□□□□ -0.19
COL10A1Q03692 AC139530.3-201ENST00000620344 690 ntBASIC13.84□□□□□ -0.19
COL10A1Q03692 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
COL10A1Q03692 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
COL10A1Q03692 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
COL10A1Q03692 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
COL10A1Q03692 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC13.84□□□□□ -0.19
COL10A1Q03692 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
COL10A1Q03692 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
COL10A1Q03692 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
COL10A1Q03692 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
COL10A1Q03692 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
COL10A1Q03692 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
COL10A1Q03692 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
COL10A1Q03692 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms