Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CNTNAP1P78357 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC19.19■□□□□ 0.66
CNTNAP1P78357 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC19.19■□□□□ 0.66
CNTNAP1P78357 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC19.19■□□□□ 0.66
CNTNAP1P78357 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC19.19■□□□□ 0.66
CNTNAP1P78357 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC19.19■□□□□ 0.66
CNTNAP1P78357 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC19.19■□□□□ 0.66
CNTNAP1P78357 MIR4321-201ENST00000592276 80 ntBASIC19.19■□□□□ 0.66
CNTNAP1P78357 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CNTNAP1P78357 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC19.19■□□□□ 0.66
CNTNAP1P78357 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC19.19■□□□□ 0.66
CNTNAP1P78357 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC19.19■□□□□ 0.66
CNTNAP1P78357 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CNTNAP1P78357 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CNTNAP1P78357 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CNTNAP1P78357 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CNTNAP1P78357 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CNTNAP1P78357 GGT3P-204ENST00000453783 1664 ntBASIC19.19■□□□□ 0.66
CNTNAP1P78357 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
CNTNAP1P78357 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CNTNAP1P78357 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CNTNAP1P78357 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CNTNAP1P78357 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC19.19■□□□□ 0.66
CNTNAP1P78357 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CNTNAP1P78357 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CNTNAP1P78357 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CNTNAP1P78357 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CNTNAP1P78357 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CNTNAP1P78357 UPF3AP2-201ENST00000457924 1132 ntBASIC19.19■□□□□ 0.66
CNTNAP1P78357 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC19.19■□□□□ 0.66
CNTNAP1P78357 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC19.19■□□□□ 0.66
CNTNAP1P78357 FAM86HP-204ENST00000513466 959 ntBASIC19.19■□□□□ 0.66
CNTNAP1P78357 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC19.19■□□□□ 0.66
CNTNAP1P78357 RERG-205ENST00000537647 935 ntTSL 2 BASIC19.19■□□□□ 0.66
CNTNAP1P78357 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CNTNAP1P78357 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CNTNAP1P78357 CU634019.7-201ENST00000624153 1185 ntBASIC19.19■□□□□ 0.66
CNTNAP1P78357 FP236241.2-201ENST00000624906 1185 ntBASIC19.19■□□□□ 0.66
CNTNAP1P78357 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CNTNAP1P78357 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CNTNAP1P78357 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CNTNAP1P78357 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CNTNAP1P78357 DEK-201ENST00000244776 1441 ntTSL 2 BASIC19.18■□□□□ 0.66
CNTNAP1P78357 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CNTNAP1P78357 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CNTNAP1P78357 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CNTNAP1P78357 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC19.18■□□□□ 0.66
CNTNAP1P78357 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
CNTNAP1P78357 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CNTNAP1P78357 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CNTNAP1P78357 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CNTNAP1P78357 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
CNTNAP1P78357 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC19.18■□□□□ 0.66
CNTNAP1P78357 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CNTNAP1P78357 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CNTNAP1P78357 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC19.18■□□□□ 0.66
CNTNAP1P78357 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CNTNAP1P78357 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CNTNAP1P78357 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CNTNAP1P78357 AC104457.1-201ENST00000401024 814 ntBASIC19.18■□□□□ 0.66
CNTNAP1P78357 OARD1-212ENST00000482515 832 ntTSL 2 BASIC19.18■□□□□ 0.66
CNTNAP1P78357 DUX4L45-201ENST00000566406 1057 ntBASIC19.18■□□□□ 0.66
CNTNAP1P78357 PAM16-215ENST00000577031 548 ntTSL 4 BASIC19.18■□□□□ 0.66
CNTNAP1P78357 MIR5572-201ENST00000583188 137 ntBASIC19.18■□□□□ 0.66
CNTNAP1P78357 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC19.18■□□□□ 0.66
CNTNAP1P78357 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNTNAP1P78357 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNTNAP1P78357 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
CNTNAP1P78357 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC19.17■□□□□ 0.66
CNTNAP1P78357 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNTNAP1P78357 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CNTNAP1P78357 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNTNAP1P78357 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNTNAP1P78357 GCK-202ENST00000345378 2421 ntTSL 2 BASIC19.17■□□□□ 0.66
CNTNAP1P78357 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CNTNAP1P78357 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CNTNAP1P78357 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC19.17■□□□□ 0.66
CNTNAP1P78357 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC19.17■□□□□ 0.66
CNTNAP1P78357 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CNTNAP1P78357 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNTNAP1P78357 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CNTNAP1P78357 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC19.17■□□□□ 0.66
CNTNAP1P78357 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CNTNAP1P78357 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNTNAP1P78357 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNTNAP1P78357 ZBTB12BP-201ENST00000314232 1122 ntBASIC19.17■□□□□ 0.66
CNTNAP1P78357 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.17■□□□□ 0.66
CNTNAP1P78357 APOA1-205ENST00000375329 927 ntTSL 2 BASIC19.17■□□□□ 0.66
CNTNAP1P78357 RPL28-203ENST00000428193 573 ntTSL 2 BASIC19.17■□□□□ 0.66
CNTNAP1P78357 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC19.17■□□□□ 0.66
CNTNAP1P78357 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC19.17■□□□□ 0.66
CNTNAP1P78357 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC19.17■□□□□ 0.66
CNTNAP1P78357 AC079316.1-201ENST00000548397 411 ntBASIC19.17■□□□□ 0.66
CNTNAP1P78357 RPL28-207ENST00000558815 616 ntTSL 2 BASIC19.17■□□□□ 0.66
CNTNAP1P78357 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC19.17■□□□□ 0.66
CNTNAP1P78357 AL391069.4-201ENST00000609583 481 ntBASIC19.17■□□□□ 0.66
CNTNAP1P78357 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC19.17■□□□□ 0.66
CNTNAP1P78357 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNTNAP1P78357 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNTNAP1P78357 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms