Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 PGM5P2-202ENST00000637225 1043 ntBASIC14.2□□□□□ -0.14
UBA52P62987 AC134684.3-201ENST00000641758 218 ntBASIC14.2□□□□□ -0.14
UBA52P62987 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.2□□□□□ -0.14
UBA52P62987 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
UBA52P62987 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
UBA52P62987 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBA52P62987 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
UBA52P62987 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBA52P62987 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.2□□□□□ -0.14
UBA52P62987 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBA52P62987 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
UBA52P62987 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBA52P62987 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBA52P62987 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBA52P62987 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBA52P62987 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.2□□□□□ -0.14
UBA52P62987 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBA52P62987 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
UBA52P62987 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBA52P62987 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBA52P62987 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBA52P62987 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
UBA52P62987 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
UBA52P62987 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBA52P62987 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.2□□□□□ -0.14
UBA52P62987 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
UBA52P62987 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.19□□□□□ -0.14
UBA52P62987 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBA52P62987 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBA52P62987 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
UBA52P62987 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBA52P62987 AC097374.2-201ENST00000618617 1306 ntBASIC14.19□□□□□ -0.14
UBA52P62987 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBA52P62987 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.19□□□□□ -0.14
UBA52P62987 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBA52P62987 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBA52P62987 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC14.19□□□□□ -0.14
UBA52P62987 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC14.19□□□□□ -0.14
UBA52P62987 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14.19□□□□□ -0.14
UBA52P62987 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBA52P62987 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.19□□□□□ -0.14
UBA52P62987 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
UBA52P62987 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBA52P62987 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBA52P62987 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBA52P62987 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
UBA52P62987 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBA52P62987 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
UBA52P62987 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
UBA52P62987 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBA52P62987 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC14.19□□□□□ -0.14
UBA52P62987 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
UBA52P62987 COA5-202ENST00000409997 557 ntTSL 4 BASIC14.19□□□□□ -0.14
UBA52P62987 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC14.19□□□□□ -0.14
UBA52P62987 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC14.19□□□□□ -0.14
UBA52P62987 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC14.19□□□□□ -0.14
UBA52P62987 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
UBA52P62987 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC14.19□□□□□ -0.14
UBA52P62987 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
UBA52P62987 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
UBA52P62987 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBA52P62987 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC14.19□□□□□ -0.14
UBA52P62987 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC14.19□□□□□ -0.14
UBA52P62987 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC14.19□□□□□ -0.14
UBA52P62987 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC14.19□□□□□ -0.14
UBA52P62987 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
UBA52P62987 MTDHP5-201ENST00000598980 586 ntBASIC14.19□□□□□ -0.14
UBA52P62987 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
UBA52P62987 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBA52P62987 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
UBA52P62987 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
UBA52P62987 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
UBA52P62987 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
UBA52P62987 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBA52P62987 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBA52P62987 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
UBA52P62987 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
UBA52P62987 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBA52P62987 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBA52P62987 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.19□□□□□ -0.14
UBA52P62987 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBA52P62987 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBA52P62987 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBA52P62987 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
UBA52P62987 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC14.18□□□□□ -0.14
UBA52P62987 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
UBA52P62987 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
UBA52P62987 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.18□□□□□ -0.14
UBA52P62987 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
UBA52P62987 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC14.18□□□□□ -0.14
UBA52P62987 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.18□□□□□ -0.14
UBA52P62987 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.18□□□□□ -0.14
UBA52P62987 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
UBA52P62987 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
UBA52P62987 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC14.18□□□□□ -0.14
UBA52P62987 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
UBA52P62987 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.18□□□□□ -0.14
UBA52P62987 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
UBA52P62987 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
UBA52P62987 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms