Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
AP3S2P59780 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
AP3S2P59780 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
AP3S2P59780 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
AP3S2P59780 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.09□□□□□ -0.15
AP3S2P59780 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.09□□□□□ -0.15
AP3S2P59780 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
AP3S2P59780 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.09□□□□□ -0.15
AP3S2P59780 SNX33P1-201ENST00000592116 1762 ntBASIC14.09□□□□□ -0.15
AP3S2P59780 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
AP3S2P59780 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
AP3S2P59780 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
AP3S2P59780 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
AP3S2P59780 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
AP3S2P59780 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.09□□□□□ -0.15
AP3S2P59780 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
AP3S2P59780 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.09□□□□□ -0.15
AP3S2P59780 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
AP3S2P59780 BAALC-202ENST00000306391 243 ntTSL 5 BASIC14.09□□□□□ -0.15
AP3S2P59780 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
AP3S2P59780 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
AP3S2P59780 BAALC-204ENST00000330955 222 ntTSL 5 BASIC14.09□□□□□ -0.15
AP3S2P59780 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
AP3S2P59780 PEX7-202ENST00000367756 680 ntTSL 3 BASIC14.09□□□□□ -0.15
AP3S2P59780 SIGLEC30P-201ENST00000455569 941 ntBASIC14.09□□□□□ -0.15
AP3S2P59780 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.09□□□□□ -0.15
AP3S2P59780 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC14.09□□□□□ -0.15
AP3S2P59780 GUSBP12-201ENST00000513727 720 ntBASIC14.09□□□□□ -0.15
AP3S2P59780 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
AP3S2P59780 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
AP3S2P59780 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC14.09□□□□□ -0.15
AP3S2P59780 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC14.09□□□□□ -0.15
AP3S2P59780 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
AP3S2P59780 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC14.09□□□□□ -0.15
AP3S2P59780 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
AP3S2P59780 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
AP3S2P59780 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
AP3S2P59780 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
AP3S2P59780 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
AP3S2P59780 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
AP3S2P59780 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
AP3S2P59780 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
AP3S2P59780 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
AP3S2P59780 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.09□□□□□ -0.15
AP3S2P59780 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC14.09□□□□□ -0.15
AP3S2P59780 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
AP3S2P59780 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
AP3S2P59780 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
AP3S2P59780 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.09□□□□□ -0.15
AP3S2P59780 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
AP3S2P59780 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
AP3S2P59780 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
AP3S2P59780 TOP3BP1-201ENST00000420768 1380 ntBASIC14.09□□□□□ -0.15
AP3S2P59780 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
AP3S2P59780 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.08□□□□□ -0.15
AP3S2P59780 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
AP3S2P59780 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
AP3S2P59780 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
AP3S2P59780 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
AP3S2P59780 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
AP3S2P59780 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
AP3S2P59780 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.15
AP3S2P59780 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
AP3S2P59780 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
AP3S2P59780 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
AP3S2P59780 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
AP3S2P59780 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.08□□□□□ -0.16
AP3S2P59780 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
AP3S2P59780 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.08□□□□□ -0.16
AP3S2P59780 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.08□□□□□ -0.16
AP3S2P59780 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
AP3S2P59780 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
AP3S2P59780 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
AP3S2P59780 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
AP3S2P59780 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
AP3S2P59780 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC14.08□□□□□ -0.16
AP3S2P59780 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC14.08□□□□□ -0.16
AP3S2P59780 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
AP3S2P59780 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
AP3S2P59780 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
AP3S2P59780 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
AP3S2P59780 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
AP3S2P59780 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC14.08□□□□□ -0.16
AP3S2P59780 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
AP3S2P59780 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
AP3S2P59780 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
AP3S2P59780 NUS1P1-201ENST00000446295 882 ntBASIC14.08□□□□□ -0.16
AP3S2P59780 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC14.08□□□□□ -0.16
AP3S2P59780 AL359075.1-203ENST00000462729 1002 ntBASIC14.08□□□□□ -0.16
AP3S2P59780 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
AP3S2P59780 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC14.08□□□□□ -0.16
AP3S2P59780 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC14.08□□□□□ -0.16
AP3S2P59780 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC14.08□□□□□ -0.16
AP3S2P59780 AD001527.2-201ENST00000622994 785 ntBASIC14.08□□□□□ -0.16
AP3S2P59780 AL590326.2-201ENST00000625139 305 ntBASIC14.08□□□□□ -0.16
AP3S2P59780 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.08□□□□□ -0.16
AP3S2P59780 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
AP3S2P59780 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
AP3S2P59780 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
AP3S2P59780 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms