Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
CLDN6P56747 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
CLDN6P56747 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CLDN6P56747 HIST1H2BPS3-201ENST00000419683 341 ntBASIC15.64■□□□□ 0.09
CLDN6P56747 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CLDN6P56747 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC15.64■□□□□ 0.09
CLDN6P56747 KRT223P-202ENST00000449164 1292 ntBASIC15.64■□□□□ 0.09
CLDN6P56747 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC15.64■□□□□ 0.09
CLDN6P56747 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLDN6P56747 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC15.64■□□□□ 0.09
CLDN6P56747 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.64■□□□□ 0.09
CLDN6P56747 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CLDN6P56747 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC15.64■□□□□ 0.09
CLDN6P56747 PACS1-203ENST00000524815 628 ntTSL 4 BASIC15.64■□□□□ 0.09
CLDN6P56747 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
CLDN6P56747 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CLDN6P56747 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC15.64■□□□□ 0.09
CLDN6P56747 ORC6-206ENST00000568364 888 ntTSL 5 BASIC15.64■□□□□ 0.09
CLDN6P56747 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
CLDN6P56747 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLDN6P56747 MIR8072-201ENST00000614241 80 ntBASIC15.64■□□□□ 0.09
CLDN6P56747 WNT11-204ENST00000621122 789 ntTSL 5 BASIC15.64■□□□□ 0.09
CLDN6P56747 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC15.64■□□□□ 0.09
CLDN6P56747 GPR182-203ENST00000622922 591 ntBASIC15.64■□□□□ 0.09
CLDN6P56747 COX11-210ENST00000639671 696 ntBASIC15.64■□□□□ 0.09
CLDN6P56747 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CLDN6P56747 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLDN6P56747 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLDN6P56747 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLDN6P56747 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLDN6P56747 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CLDN6P56747 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLDN6P56747 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLDN6P56747 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLDN6P56747 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLDN6P56747 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.63■□□□□ 0.09
CLDN6P56747 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
CLDN6P56747 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLDN6P56747 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLDN6P56747 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.63■□□□□ 0.09
CLDN6P56747 AC141586.5-201ENST00000624546 2050 ntBASIC15.63■□□□□ 0.09
CLDN6P56747 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC15.63■□□□□ 0.09
CLDN6P56747 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
CLDN6P56747 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLDN6P56747 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC15.63■□□□□ 0.09
CLDN6P56747 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLDN6P56747 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLDN6P56747 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
CLDN6P56747 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC15.63■□□□□ 0.09
CLDN6P56747 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLDN6P56747 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CLDN6P56747 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLDN6P56747 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC15.63■□□□□ 0.09
CLDN6P56747 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.63■□□□□ 0.09
CLDN6P56747 AC008735.3-201ENST00000596646 500 ntBASIC15.63■□□□□ 0.09
CLDN6P56747 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC15.63■□□□□ 0.09
CLDN6P56747 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC15.63■□□□□ 0.09
CLDN6P56747 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLDN6P56747 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC15.63■□□□□ 0.09
CLDN6P56747 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
CLDN6P56747 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLDN6P56747 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
CLDN6P56747 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC15.63■□□□□ 0.09
CLDN6P56747 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
CLDN6P56747 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CLDN6P56747 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
CLDN6P56747 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLDN6P56747 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLDN6P56747 CDC14C-201ENST00000428251 1719 ntBASIC15.63■□□□□ 0.09
CLDN6P56747 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.63■□□□□ 0.09
CLDN6P56747 LINC02012-201ENST00000608206 1725 ntBASIC15.63■□□□□ 0.09
CLDN6P56747 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLDN6P56747 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
CLDN6P56747 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
CLDN6P56747 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC15.62■□□□□ 0.09
CLDN6P56747 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLDN6P56747 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CLDN6P56747 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC15.62■□□□□ 0.09
CLDN6P56747 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
CLDN6P56747 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
CLDN6P56747 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC15.62■□□□□ 0.09
CLDN6P56747 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLDN6P56747 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC15.62■□□□□ 0.09
CLDN6P56747 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC15.62■□□□□ 0.09
CLDN6P56747 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC15.62■□□□□ 0.09
CLDN6P56747 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
CLDN6P56747 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLDN6P56747 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
CLDN6P56747 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLDN6P56747 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
CLDN6P56747 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC15.62■□□□□ 0.09
CLDN6P56747 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CLDN6P56747 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CLDN6P56747 SERBP1P3-201ENST00000459980 809 ntBASIC15.62■□□□□ 0.09
CLDN6P56747 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLDN6P56747 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC15.62■□□□□ 0.09
CLDN6P56747 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC15.62■□□□□ 0.09
CLDN6P56747 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CLDN6P56747 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
CLDN6P56747 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms