Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
PER3P56645 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PER3P56645 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PER3P56645 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
PER3P56645 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC15.22■□□□□ 0.03
PER3P56645 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC15.22■□□□□ 0.03
PER3P56645 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
PER3P56645 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PER3P56645 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PER3P56645 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PER3P56645 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PER3P56645 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC15.22■□□□□ 0.03
PER3P56645 AC079140.1-201ENST00000508039 487 ntBASIC15.22■□□□□ 0.03
PER3P56645 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC15.22■□□□□ 0.03
PER3P56645 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC15.22■□□□□ 0.03
PER3P56645 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC15.22■□□□□ 0.03
PER3P56645 AC140878.1-201ENST00000565277 250 ntBASIC15.22■□□□□ 0.03
PER3P56645 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PER3P56645 CECR7-204ENST00000609932 568 ntTSL 2 BASIC15.22■□□□□ 0.03
PER3P56645 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
PER3P56645 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.22■□□□□ 0.03
PER3P56645 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PER3P56645 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PER3P56645 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PER3P56645 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC15.22■□□□□ 0.03
PER3P56645 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PER3P56645 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PER3P56645 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
PER3P56645 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PER3P56645 AC022188.1-201ENST00000620960 1664 ntBASIC15.22■□□□□ 0.03
PER3P56645 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC15.22■□□□□ 0.03
PER3P56645 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
PER3P56645 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
PER3P56645 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
PER3P56645 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PER3P56645 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
PER3P56645 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PER3P56645 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC15.21■□□□□ 0.03
PER3P56645 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PER3P56645 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
PER3P56645 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.21■□□□□ 0.03
PER3P56645 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PER3P56645 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PER3P56645 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC15.21■□□□□ 0.03
PER3P56645 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PER3P56645 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PER3P56645 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC15.21■□□□□ 0.03
PER3P56645 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
PER3P56645 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC15.21■□□□□ 0.03
PER3P56645 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC15.21■□□□□ 0.03
PER3P56645 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC15.21■□□□□ 0.03
PER3P56645 KRT8P48-201ENST00000515599 1220 ntBASIC15.21■□□□□ 0.03
PER3P56645 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC15.21■□□□□ 0.03
PER3P56645 RPL28-209ENST00000560055 670 ntTSL 3 BASIC15.21■□□□□ 0.03
PER3P56645 RARRES2P8-201ENST00000566335 367 ntBASIC15.21■□□□□ 0.03
PER3P56645 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC15.21■□□□□ 0.03
PER3P56645 RN7SL204P-201ENST00000582831 262 ntBASIC15.21■□□□□ 0.03
PER3P56645 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
PER3P56645 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PER3P56645 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC15.21■□□□□ 0.03
PER3P56645 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
PER3P56645 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.02
PER3P56645 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
PER3P56645 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
PER3P56645 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
PER3P56645 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.21■□□□□ 0.02
PER3P56645 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
PER3P56645 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
PER3P56645 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
PER3P56645 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.21■□□□□ 0.02
PER3P56645 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.21■□□□□ 0.02
PER3P56645 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
PER3P56645 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
PER3P56645 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PER3P56645 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC15.2■□□□□ 0.02
PER3P56645 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PER3P56645 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PER3P56645 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
PER3P56645 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
PER3P56645 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PER3P56645 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PER3P56645 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
PER3P56645 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
PER3P56645 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PER3P56645 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
PER3P56645 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
PER3P56645 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
PER3P56645 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PER3P56645 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PER3P56645 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PER3P56645 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PER3P56645 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC15.2■□□□□ 0.02
PER3P56645 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PER3P56645 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PER3P56645 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
PER3P56645 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC15.2■□□□□ 0.02
PER3P56645 AC087163.2-201ENST00000457299 853 ntBASIC15.2■□□□□ 0.02
PER3P56645 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.2■□□□□ 0.02
PER3P56645 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
PER3P56645 AC008761.3-201ENST00000624803 892 ntBASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms