Protein–RNA interactions for Protein: P56539

CAV3, Caveolin-3, humanhuman

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAV3P56539 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC14.66□□□□□ -0.06
CAV3P56539 FOSL1P1-201ENST00000511041 816 ntBASIC14.66□□□□□ -0.06
CAV3P56539 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CAV3P56539 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
CAV3P56539 AC138894.3-201ENST00000603787 634 ntBASIC14.66□□□□□ -0.06
CAV3P56539 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC14.66□□□□□ -0.06
CAV3P56539 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
CAV3P56539 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC14.66□□□□□ -0.06
CAV3P56539 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
CAV3P56539 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
CAV3P56539 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.66□□□□□ -0.06
CAV3P56539 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CAV3P56539 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.66□□□□□ -0.06
CAV3P56539 C1R-202ENST00000536053 2347 ntTSL 2 BASIC14.66□□□□□ -0.06
CAV3P56539 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CAV3P56539 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CAV3P56539 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.66□□□□□ -0.06
CAV3P56539 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.66□□□□□ -0.06
CAV3P56539 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CAV3P56539 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.66□□□□□ -0.06
CAV3P56539 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CAV3P56539 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CAV3P56539 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
CAV3P56539 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.66□□□□□ -0.06
CAV3P56539 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CAV3P56539 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CAV3P56539 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.66□□□□□ -0.06
CAV3P56539 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.66□□□□□ -0.06
CAV3P56539 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CAV3P56539 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.66□□□□□ -0.06
CAV3P56539 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CAV3P56539 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CAV3P56539 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.66□□□□□ -0.06
CAV3P56539 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CAV3P56539 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CAV3P56539 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CAV3P56539 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CAV3P56539 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC14.66□□□□□ -0.06
CAV3P56539 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC14.66□□□□□ -0.06
CAV3P56539 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CAV3P56539 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CAV3P56539 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CAV3P56539 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CAV3P56539 HNRNPRP1-201ENST00000453465 1695 ntBASIC14.65□□□□□ -0.06
CAV3P56539 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CAV3P56539 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.65□□□□□ -0.06
CAV3P56539 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC14.65□□□□□ -0.06
CAV3P56539 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
CAV3P56539 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CAV3P56539 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CAV3P56539 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
CAV3P56539 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CAV3P56539 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CAV3P56539 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CAV3P56539 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CAV3P56539 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CAV3P56539 AC003669.1-201ENST00000334569 611 ntBASIC14.65□□□□□ -0.06
CAV3P56539 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CAV3P56539 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CAV3P56539 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CAV3P56539 RCN1P2-201ENST00000398357 915 ntBASIC14.65□□□□□ -0.06
CAV3P56539 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CAV3P56539 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC14.65□□□□□ -0.06
CAV3P56539 NUS1P2-201ENST00000417358 873 ntBASIC14.65□□□□□ -0.06
CAV3P56539 THAP5-204ENST00000438865 868 ntTSL 2 BASIC14.65□□□□□ -0.06
CAV3P56539 NKTR-203ENST00000442970 646 ntTSL 2 BASIC14.65□□□□□ -0.06
CAV3P56539 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CAV3P56539 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC14.65□□□□□ -0.06
CAV3P56539 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC14.65□□□□□ -0.06
CAV3P56539 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC14.65□□□□□ -0.06
CAV3P56539 CLEC4GP1-201ENST00000596555 870 ntBASIC14.65□□□□□ -0.06
CAV3P56539 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC14.65□□□□□ -0.06
CAV3P56539 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC14.65□□□□□ -0.06
CAV3P56539 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CAV3P56539 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CAV3P56539 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CAV3P56539 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CAV3P56539 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CAV3P56539 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.65□□□□□ -0.06
CAV3P56539 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CAV3P56539 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC14.65□□□□□ -0.06
CAV3P56539 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CAV3P56539 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC14.65□□□□□ -0.06
CAV3P56539 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CAV3P56539 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
CAV3P56539 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
CAV3P56539 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CAV3P56539 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CAV3P56539 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
CAV3P56539 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
CAV3P56539 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CAV3P56539 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CAV3P56539 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.64□□□□□ -0.07
CAV3P56539 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CAV3P56539 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CAV3P56539 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.64□□□□□ -0.07
CAV3P56539 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
CAV3P56539 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.64□□□□□ -0.07
CAV3P56539 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
CAV3P56539 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms