Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
LIMK2P53671 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
LIMK2P53671 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
LIMK2P53671 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
LIMK2P53671 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.51■□□□□ 0.23
LIMK2P53671 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LIMK2P53671 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LIMK2P53671 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LIMK2P53671 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LIMK2P53671 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
LIMK2P53671 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
LIMK2P53671 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LIMK2P53671 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.51■□□□□ 0.23
LIMK2P53671 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
LIMK2P53671 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LIMK2P53671 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LIMK2P53671 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LIMK2P53671 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
LIMK2P53671 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
LIMK2P53671 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LIMK2P53671 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LIMK2P53671 REM2-202ENST00000536884 1331 ntTSL 2 BASIC16.5■□□□□ 0.23
LIMK2P53671 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LIMK2P53671 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LIMK2P53671 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
LIMK2P53671 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LIMK2P53671 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LIMK2P53671 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.5■□□□□ 0.23
LIMK2P53671 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LIMK2P53671 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LIMK2P53671 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LIMK2P53671 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LIMK2P53671 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
LIMK2P53671 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LIMK2P53671 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC16.5■□□□□ 0.23
LIMK2P53671 FAM58CP-201ENST00000435741 640 ntBASIC16.5■□□□□ 0.23
LIMK2P53671 METTL21AP1-201ENST00000438852 635 ntBASIC16.5■□□□□ 0.23
LIMK2P53671 FAM185BP-201ENST00000443595 716 ntBASIC16.5■□□□□ 0.23
LIMK2P53671 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.5■□□□□ 0.23
LIMK2P53671 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.5■□□□□ 0.23
LIMK2P53671 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
LIMK2P53671 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.5■□□□□ 0.23
LIMK2P53671 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.5■□□□□ 0.23
LIMK2P53671 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
LIMK2P53671 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.5■□□□□ 0.23
LIMK2P53671 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LIMK2P53671 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.5■□□□□ 0.23
LIMK2P53671 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
LIMK2P53671 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.5■□□□□ 0.23
LIMK2P53671 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LIMK2P53671 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LIMK2P53671 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
LIMK2P53671 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LIMK2P53671 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.49■□□□□ 0.23
LIMK2P53671 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LIMK2P53671 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LIMK2P53671 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.49■□□□□ 0.23
LIMK2P53671 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LIMK2P53671 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
LIMK2P53671 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LIMK2P53671 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LIMK2P53671 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
LIMK2P53671 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LIMK2P53671 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LIMK2P53671 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.49■□□□□ 0.23
LIMK2P53671 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.49■□□□□ 0.23
LIMK2P53671 HMGN1P19-201ENST00000436976 333 ntBASIC16.49■□□□□ 0.23
LIMK2P53671 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.49■□□□□ 0.23
LIMK2P53671 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.49■□□□□ 0.23
LIMK2P53671 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.49■□□□□ 0.23
LIMK2P53671 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.49■□□□□ 0.23
LIMK2P53671 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LIMK2P53671 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.49■□□□□ 0.23
LIMK2P53671 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LIMK2P53671 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.49■□□□□ 0.23
LIMK2P53671 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LIMK2P53671 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LIMK2P53671 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.49■□□□□ 0.23
LIMK2P53671 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.49■□□□□ 0.23
LIMK2P53671 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
LIMK2P53671 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.49■□□□□ 0.23
LIMK2P53671 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LIMK2P53671 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
LIMK2P53671 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.48■□□□□ 0.23
LIMK2P53671 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LIMK2P53671 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
LIMK2P53671 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.48■□□□□ 0.23
LIMK2P53671 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
LIMK2P53671 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
LIMK2P53671 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.48■□□□□ 0.23
LIMK2P53671 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LIMK2P53671 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.48■□□□□ 0.23
LIMK2P53671 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LIMK2P53671 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LIMK2P53671 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LIMK2P53671 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.48■□□□□ 0.23
LIMK2P53671 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
LIMK2P53671 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.48■□□□□ 0.23
LIMK2P53671 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.48■□□□□ 0.23
LIMK2P53671 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms