Protein–RNA interactions for Protein: P48960

CD97, CD97 antigen, humanhuman

Predictions only

Length 835 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD97P48960 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CD97P48960 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CD97P48960 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CD97P48960 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CD97P48960 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CD97P48960 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.8■□□□□ 0.12
CD97P48960 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CD97P48960 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
CD97P48960 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CD97P48960 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CD97P48960 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CD97P48960 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CD97P48960 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CD97P48960 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CD97P48960 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.79■□□□□ 0.12
CD97P48960 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.79■□□□□ 0.12
CD97P48960 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
CD97P48960 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.79■□□□□ 0.12
CD97P48960 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CD97P48960 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CD97P48960 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CD97P48960 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CD97P48960 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CD97P48960 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CD97P48960 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC15.79■□□□□ 0.12
CD97P48960 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
CD97P48960 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CD97P48960 REM2-202ENST00000536884 1331 ntTSL 2 BASIC15.79■□□□□ 0.12
CD97P48960 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CD97P48960 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CD97P48960 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CD97P48960 MYCLP1-201ENST00000372451 1075 ntBASIC15.79■□□□□ 0.12
CD97P48960 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CD97P48960 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CD97P48960 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CD97P48960 PMS2P4-201ENST00000412466 1052 ntBASIC15.79■□□□□ 0.12
CD97P48960 ACTG1P4-201ENST00000425123 1122 ntBASIC15.79■□□□□ 0.12
CD97P48960 FAM86GP-201ENST00000448322 971 ntBASIC15.79■□□□□ 0.12
CD97P48960 AC023141.5-201ENST00000458585 616 ntBASIC15.79■□□□□ 0.12
CD97P48960 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC15.79■□□□□ 0.12
CD97P48960 AC109322.1-201ENST00000524499 1264 ntBASIC15.79■□□□□ 0.12
CD97P48960 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC15.79■□□□□ 0.12
CD97P48960 AC068137.2-201ENST00000605408 478 ntBASIC15.79■□□□□ 0.12
CD97P48960 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CD97P48960 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CD97P48960 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CD97P48960 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CD97P48960 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CD97P48960 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CD97P48960 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CD97P48960 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.79■□□□□ 0.12
CD97P48960 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CD97P48960 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC15.79■□□□□ 0.12
CD97P48960 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CD97P48960 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CD97P48960 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CD97P48960 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
CD97P48960 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC15.78■□□□□ 0.12
CD97P48960 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CD97P48960 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
CD97P48960 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC15.78■□□□□ 0.12
CD97P48960 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CD97P48960 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CD97P48960 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.78■□□□□ 0.12
CD97P48960 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CD97P48960 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC15.78■□□□□ 0.12
CD97P48960 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC15.78■□□□□ 0.12
CD97P48960 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC15.78■□□□□ 0.12
CD97P48960 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CD97P48960 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CD97P48960 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CD97P48960 GK-202ENST00000378941 458 ntTSL 3 BASIC15.78■□□□□ 0.12
CD97P48960 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CD97P48960 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CD97P48960 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC15.78■□□□□ 0.12
CD97P48960 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC15.78■□□□□ 0.12
CD97P48960 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC15.78■□□□□ 0.12
CD97P48960 AC067863.1-201ENST00000494933 530 ntBASIC15.78■□□□□ 0.12
CD97P48960 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC15.78■□□□□ 0.12
CD97P48960 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC15.78■□□□□ 0.12
CD97P48960 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC15.78■□□□□ 0.12
CD97P48960 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC15.78■□□□□ 0.12
CD97P48960 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.78■□□□□ 0.12
CD97P48960 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC15.78■□□□□ 0.12
CD97P48960 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC15.78■□□□□ 0.12
CD97P48960 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC15.78■□□□□ 0.12
CD97P48960 MED16-214ENST00000617672 554 ntTSL 5 BASIC15.78■□□□□ 0.12
CD97P48960 LINC01451-201ENST00000623792 534 ntBASIC15.78■□□□□ 0.12
CD97P48960 LINC00628-201ENST00000628516 1289 ntBASIC15.78■□□□□ 0.12
CD97P48960 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC15.78■□□□□ 0.12
CD97P48960 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CD97P48960 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CD97P48960 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CD97P48960 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CD97P48960 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CD97P48960 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CD97P48960 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CD97P48960 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CD97P48960 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC15.78■□□□□ 0.12
CD97P48960 LINC00304-203ENST00000565008 1864 ntBASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms