Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC15.74■□□□□ 0.11
SLC6A12P48065 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC15.74■□□□□ 0.11
SLC6A12P48065 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC15.74■□□□□ 0.11
SLC6A12P48065 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC15.74■□□□□ 0.11
SLC6A12P48065 AC061975.2-201ENST00000581722 295 ntBASIC15.74■□□□□ 0.11
SLC6A12P48065 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC15.74■□□□□ 0.11
SLC6A12P48065 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC15.74■□□□□ 0.11
SLC6A12P48065 SSH2-211ENST00000590153 570 ntTSL 4 BASIC15.74■□□□□ 0.11
SLC6A12P48065 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC15.74■□□□□ 0.11
SLC6A12P48065 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC15.74■□□□□ 0.11
SLC6A12P48065 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SLC6A12P48065 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC15.74■□□□□ 0.11
SLC6A12P48065 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.74■□□□□ 0.11
SLC6A12P48065 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC15.74■□□□□ 0.11
SLC6A12P48065 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
SLC6A12P48065 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SLC6A12P48065 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
SLC6A12P48065 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
SLC6A12P48065 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.74■□□□□ 0.11
SLC6A12P48065 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC15.74■□□□□ 0.11
SLC6A12P48065 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SLC6A12P48065 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.73■□□□□ 0.11
SLC6A12P48065 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.73■□□□□ 0.11
SLC6A12P48065 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.73■□□□□ 0.11
SLC6A12P48065 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
SLC6A12P48065 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SLC6A12P48065 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SLC6A12P48065 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC15.73■□□□□ 0.11
SLC6A12P48065 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.73■□□□□ 0.11
SLC6A12P48065 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SLC6A12P48065 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.73■□□□□ 0.11
SLC6A12P48065 AP005117.1-202ENST00000581724 1908 ntBASIC15.73■□□□□ 0.11
SLC6A12P48065 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC15.73■□□□□ 0.11
SLC6A12P48065 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SLC6A12P48065 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SLC6A12P48065 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC15.73■□□□□ 0.11
SLC6A12P48065 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC15.73■□□□□ 0.11
SLC6A12P48065 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
SLC6A12P48065 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
SLC6A12P48065 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC15.73■□□□□ 0.11
SLC6A12P48065 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC15.73■□□□□ 0.11
SLC6A12P48065 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC15.73■□□□□ 0.11
SLC6A12P48065 AP000842.3-202ENST00000569238 1080 ntBASIC15.73■□□□□ 0.11
SLC6A12P48065 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC15.73■□□□□ 0.11
SLC6A12P48065 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
SLC6A12P48065 AC084121.4-201ENST00000641598 221 ntBASIC15.73■□□□□ 0.11
SLC6A12P48065 AF228730.8-201ENST00000642140 221 ntBASIC15.73■□□□□ 0.11
SLC6A12P48065 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
SLC6A12P48065 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
SLC6A12P48065 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC15.73■□□□□ 0.11
SLC6A12P48065 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
SLC6A12P48065 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC15.73■□□□□ 0.11
SLC6A12P48065 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
SLC6A12P48065 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SLC6A12P48065 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SLC6A12P48065 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
SLC6A12P48065 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
SLC6A12P48065 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.73■□□□□ 0.11
SLC6A12P48065 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC15.73■□□□□ 0.11
SLC6A12P48065 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC15.73■□□□□ 0.11
SLC6A12P48065 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SLC6A12P48065 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SLC6A12P48065 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15.73■□□□□ 0.11
SLC6A12P48065 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SLC6A12P48065 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SLC6A12P48065 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SLC6A12P48065 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
SLC6A12P48065 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.72■□□□□ 0.11
SLC6A12P48065 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.72■□□□□ 0.11
SLC6A12P48065 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC15.72■□□□□ 0.11
SLC6A12P48065 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
SLC6A12P48065 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
SLC6A12P48065 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SLC6A12P48065 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
SLC6A12P48065 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
SLC6A12P48065 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.72■□□□□ 0.11
SLC6A12P48065 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SLC6A12P48065 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.72■□□□□ 0.11
SLC6A12P48065 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
SLC6A12P48065 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SLC6A12P48065 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC15.72■□□□□ 0.11
SLC6A12P48065 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
SLC6A12P48065 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SLC6A12P48065 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.72■□□□□ 0.11
SLC6A12P48065 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
SLC6A12P48065 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SLC6A12P48065 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC15.72■□□□□ 0.11
SLC6A12P48065 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC15.72■□□□□ 0.11
SLC6A12P48065 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC15.72■□□□□ 0.11
SLC6A12P48065 GATB-205ENST00000508611 605 ntTSL 2 BASIC15.72■□□□□ 0.11
SLC6A12P48065 KRT8P23-201ENST00000560090 1207 ntBASIC15.72■□□□□ 0.11
SLC6A12P48065 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC15.72■□□□□ 0.11
SLC6A12P48065 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
SLC6A12P48065 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC15.72■□□□□ 0.11
SLC6A12P48065 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC15.72■□□□□ 0.11
SLC6A12P48065 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
SLC6A12P48065 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SLC6A12P48065 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
SLC6A12P48065 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.72■□□□□ 0.11
SLC6A12P48065 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms