Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC13.45□□□□□ -0.26
CDX1P47902 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
CDX1P47902 AC104109.2-201ENST00000602919 1418 ntBASIC13.45□□□□□ -0.26
CDX1P47902 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CDX1P47902 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC13.45□□□□□ -0.26
CDX1P47902 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC13.45□□□□□ -0.26
CDX1P47902 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
CDX1P47902 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
CDX1P47902 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CDX1P47902 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
CDX1P47902 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CDX1P47902 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
CDX1P47902 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC13.45□□□□□ -0.26
CDX1P47902 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
CDX1P47902 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC13.44□□□□□ -0.26
CDX1P47902 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
CDX1P47902 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC13.44□□□□□ -0.26
CDX1P47902 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC13.44□□□□□ -0.26
CDX1P47902 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CDX1P47902 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC13.44□□□□□ -0.26
CDX1P47902 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
CDX1P47902 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CDX1P47902 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CDX1P47902 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
CDX1P47902 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CDX1P47902 AL122018.1-201ENST00000446607 2310 ntBASIC13.44□□□□□ -0.26
CDX1P47902 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CDX1P47902 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CDX1P47902 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC13.44□□□□□ -0.26
CDX1P47902 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CDX1P47902 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CDX1P47902 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CDX1P47902 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CDX1P47902 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
CDX1P47902 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC13.44□□□□□ -0.26
CDX1P47902 LINC00982-205ENST00000420957 435 ntBASIC13.44□□□□□ -0.26
CDX1P47902 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC13.44□□□□□ -0.26
CDX1P47902 CALM1-205ENST00000553542 877 ntTSL 5 BASIC13.44□□□□□ -0.26
CDX1P47902 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
CDX1P47902 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC13.44□□□□□ -0.26
CDX1P47902 AC027601.4-201ENST00000611259 610 ntBASIC13.44□□□□□ -0.26
CDX1P47902 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC13.44□□□□□ -0.26
CDX1P47902 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC13.44□□□□□ -0.26
CDX1P47902 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CDX1P47902 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC13.44□□□□□ -0.26
CDX1P47902 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
CDX1P47902 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
CDX1P47902 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
CDX1P47902 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CDX1P47902 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC13.44□□□□□ -0.26
CDX1P47902 LINC00304-203ENST00000565008 1864 ntBASIC13.44□□□□□ -0.26
CDX1P47902 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC13.44□□□□□ -0.26
CDX1P47902 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
CDX1P47902 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
CDX1P47902 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
CDX1P47902 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CDX1P47902 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CDX1P47902 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
CDX1P47902 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
CDX1P47902 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC13.43□□□□□ -0.26
CDX1P47902 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
CDX1P47902 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
CDX1P47902 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
CDX1P47902 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC13.43□□□□□ -0.26
CDX1P47902 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CDX1P47902 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC13.43□□□□□ -0.26
CDX1P47902 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CDX1P47902 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC13.43□□□□□ -0.26
CDX1P47902 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CDX1P47902 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CDX1P47902 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CDX1P47902 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CDX1P47902 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CDX1P47902 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC13.43□□□□□ -0.26
CDX1P47902 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CDX1P47902 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC13.43□□□□□ -0.26
CDX1P47902 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
CDX1P47902 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
CDX1P47902 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
CDX1P47902 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC13.43□□□□□ -0.26
CDX1P47902 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC13.43□□□□□ -0.26
CDX1P47902 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
CDX1P47902 AC034105.1-201ENST00000563488 319 ntBASIC13.43□□□□□ -0.26
CDX1P47902 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CDX1P47902 FAM197Y3-203ENST00000618346 717 ntBASIC13.43□□□□□ -0.26
CDX1P47902 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CDX1P47902 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CDX1P47902 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CDX1P47902 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CDX1P47902 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
CDX1P47902 TK2-221ENST00000620035 5060 ntTSL 2 BASIC13.43□□□□□ -0.26
CDX1P47902 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CDX1P47902 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC13.43□□□□□ -0.26
CDX1P47902 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CDX1P47902 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CDX1P47902 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
CDX1P47902 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CDX1P47902 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CDX1P47902 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC13.43□□□□□ -0.26
CDX1P47902 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC13.43□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms