Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
COL15A1P39059 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
COL15A1P39059 U82695.1-201ENST00000635752 1889 ntBASIC20.49■□□□□ 0.87
COL15A1P39059 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COL15A1P39059 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
COL15A1P39059 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC20.48■□□□□ 0.87
COL15A1P39059 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC20.48■□□□□ 0.87
COL15A1P39059 PAM16-204ENST00000571941 674 ntTSL 3 BASIC20.48■□□□□ 0.87
COL15A1P39059 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
COL15A1P39059 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC20.48■□□□□ 0.87
COL15A1P39059 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
COL15A1P39059 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COL15A1P39059 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC20.48■□□□□ 0.87
COL15A1P39059 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC20.48■□□□□ 0.87
COL15A1P39059 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
COL15A1P39059 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COL15A1P39059 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC20.48■□□□□ 0.87
COL15A1P39059 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
COL15A1P39059 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COL15A1P39059 AC106886.4-201ENST00000623557 2502 ntBASIC20.48■□□□□ 0.87
COL15A1P39059 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC20.48■□□□□ 0.87
COL15A1P39059 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
COL15A1P39059 AC020916.1-201ENST00000587762 1774 ntBASIC20.48■□□□□ 0.87
COL15A1P39059 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
COL15A1P39059 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
COL15A1P39059 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC20.47■□□□□ 0.87
COL15A1P39059 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC20.47■□□□□ 0.87
COL15A1P39059 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
COL15A1P39059 TIMM17BP1-201ENST00000545713 516 ntBASIC20.47■□□□□ 0.87
COL15A1P39059 AC092552.1-201ENST00000547243 906 ntBASIC20.47■□□□□ 0.87
COL15A1P39059 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC20.47■□□□□ 0.87
COL15A1P39059 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC20.47■□□□□ 0.87
COL15A1P39059 LINC01115-203ENST00000606068 577 ntBASIC20.47■□□□□ 0.87
COL15A1P39059 AL365330.1-201ENST00000607459 531 ntBASIC20.47■□□□□ 0.87
COL15A1P39059 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC20.47■□□□□ 0.87
COL15A1P39059 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
COL15A1P39059 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
COL15A1P39059 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
COL15A1P39059 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
COL15A1P39059 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
COL15A1P39059 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
COL15A1P39059 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
COL15A1P39059 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC20.47■□□□□ 0.87
COL15A1P39059 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC20.47■□□□□ 0.87
COL15A1P39059 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
COL15A1P39059 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
COL15A1P39059 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.47■□□□□ 0.87
COL15A1P39059 Z97205.2-201ENST00000564697 1639 ntBASIC20.47■□□□□ 0.87
COL15A1P39059 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC20.46■□□□□ 0.87
COL15A1P39059 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
COL15A1P39059 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC20.46■□□□□ 0.87
COL15A1P39059 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC20.46■□□□□ 0.87
COL15A1P39059 POU5F1P6-201ENST00000466990 990 ntBASIC20.46■□□□□ 0.87
COL15A1P39059 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC20.46■□□□□ 0.87
COL15A1P39059 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
COL15A1P39059 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC20.46■□□□□ 0.87
COL15A1P39059 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC20.46■□□□□ 0.87
COL15A1P39059 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC20.46■□□□□ 0.87
COL15A1P39059 WNT11-204ENST00000621122 789 ntTSL 5 BASIC20.46■□□□□ 0.87
COL15A1P39059 AL158212.4-201ENST00000624062 1286 ntBASIC20.46■□□□□ 0.87
COL15A1P39059 AC009053.2-201ENST00000563701 2365 ntBASIC20.46■□□□□ 0.87
COL15A1P39059 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC20.46■□□□□ 0.87
COL15A1P39059 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
COL15A1P39059 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC20.46■□□□□ 0.87
COL15A1P39059 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
COL15A1P39059 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
COL15A1P39059 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC20.46■□□□□ 0.87
COL15A1P39059 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
COL15A1P39059 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
COL15A1P39059 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC20.46■□□□□ 0.87
COL15A1P39059 DEK-201ENST00000244776 1441 ntTSL 2 BASIC20.46■□□□□ 0.87
COL15A1P39059 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
COL15A1P39059 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
COL15A1P39059 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
COL15A1P39059 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
COL15A1P39059 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
COL15A1P39059 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
COL15A1P39059 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC20.46■□□□□ 0.87
COL15A1P39059 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC20.46■□□□□ 0.87
COL15A1P39059 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC20.46■□□□□ 0.87
COL15A1P39059 BNIP3P42-201ENST00000454982 569 ntBASIC20.46■□□□□ 0.87
COL15A1P39059 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
COL15A1P39059 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
COL15A1P39059 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
COL15A1P39059 BNIP3P29-201ENST00000598302 571 ntBASIC20.46■□□□□ 0.87
COL15A1P39059 AC011447.5-201ENST00000616168 564 ntBASIC20.46■□□□□ 0.87
COL15A1P39059 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
COL15A1P39059 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
COL15A1P39059 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC20.46■□□□□ 0.87
COL15A1P39059 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC20.45■□□□□ 0.87
COL15A1P39059 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC20.45■□□□□ 0.87
COL15A1P39059 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC20.45■□□□□ 0.87
COL15A1P39059 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
COL15A1P39059 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
COL15A1P39059 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
COL15A1P39059 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
COL15A1P39059 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC20.45■□□□□ 0.86
COL15A1P39059 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC20.45■□□□□ 0.86
COL15A1P39059 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC20.45■□□□□ 0.86
COL15A1P39059 REXO1L6P-201ENST00000603433 1515 ntBASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms