Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCK1P35558 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
PCK1P35558 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
PCK1P35558 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCK1P35558 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCK1P35558 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCK1P35558 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
PCK1P35558 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC17.29■□□□□ 0.36
PCK1P35558 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC17.29■□□□□ 0.36
PCK1P35558 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCK1P35558 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCK1P35558 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCK1P35558 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
PCK1P35558 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
PCK1P35558 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCK1P35558 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PCK1P35558 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
PCK1P35558 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
PCK1P35558 AL513523.2-202ENST00000427283 2040 ntBASIC17.28■□□□□ 0.36
PCK1P35558 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.28■□□□□ 0.36
PCK1P35558 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
PCK1P35558 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.28■□□□□ 0.36
PCK1P35558 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17.28■□□□□ 0.36
PCK1P35558 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PCK1P35558 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.28■□□□□ 0.36
PCK1P35558 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCK1P35558 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.28■□□□□ 0.36
PCK1P35558 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.28■□□□□ 0.36
PCK1P35558 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCK1P35558 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
PCK1P35558 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC17.28■□□□□ 0.36
PCK1P35558 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC17.28■□□□□ 0.36
PCK1P35558 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.28■□□□□ 0.36
PCK1P35558 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
PCK1P35558 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.28■□□□□ 0.36
PCK1P35558 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.28■□□□□ 0.36
PCK1P35558 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.28■□□□□ 0.36
PCK1P35558 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
PCK1P35558 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.28■□□□□ 0.36
PCK1P35558 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.28■□□□□ 0.36
PCK1P35558 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
PCK1P35558 AC064836.3-201ENST00000607928 673 ntBASIC17.28■□□□□ 0.36
PCK1P35558 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.28■□□□□ 0.36
PCK1P35558 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC17.28■□□□□ 0.36
PCK1P35558 BX640515.1-201ENST00000617215 977 ntBASIC17.28■□□□□ 0.36
PCK1P35558 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
PCK1P35558 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCK1P35558 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.28■□□□□ 0.36
PCK1P35558 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC17.28■□□□□ 0.36
PCK1P35558 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCK1P35558 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCK1P35558 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC17.28■□□□□ 0.36
PCK1P35558 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCK1P35558 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
PCK1P35558 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC17.28■□□□□ 0.36
PCK1P35558 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.28■□□□□ 0.36
PCK1P35558 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCK1P35558 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.28■□□□□ 0.36
PCK1P35558 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17.28■□□□□ 0.36
PCK1P35558 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCK1P35558 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCK1P35558 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCK1P35558 AL365209.1-201ENST00000624418 6473 ntBASIC17.28■□□□□ 0.36
PCK1P35558 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCK1P35558 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCK1P35558 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC17.27■□□□□ 0.36
PCK1P35558 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC17.27■□□□□ 0.36
PCK1P35558 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCK1P35558 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.27■□□□□ 0.36
PCK1P35558 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCK1P35558 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
PCK1P35558 AC023824.1-201ENST00000562945 2975 ntBASIC17.27■□□□□ 0.36
PCK1P35558 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.27■□□□□ 0.36
PCK1P35558 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCK1P35558 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCK1P35558 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCK1P35558 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.27■□□□□ 0.36
PCK1P35558 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC17.27■□□□□ 0.36
PCK1P35558 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
PCK1P35558 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC17.27■□□□□ 0.36
PCK1P35558 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCK1P35558 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCK1P35558 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PCK1P35558 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
PCK1P35558 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PCK1P35558 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PCK1P35558 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
PCK1P35558 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
PCK1P35558 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PCK1P35558 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PCK1P35558 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCK1P35558 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.26■□□□□ 0.35
PCK1P35558 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC17.26■□□□□ 0.35
PCK1P35558 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCK1P35558 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
PCK1P35558 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
PCK1P35558 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCK1P35558 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.26■□□□□ 0.35
PCK1P35558 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCK1P35558 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms