Protein–RNA interactions for Protein: P35443

THBS4, Thrombospondin-4, humanhuman

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS4P35443 AC005052.1-201ENST00000625181 2492 ntBASIC14.42□□□□□ -0.1
THBS4P35443 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC14.42□□□□□ -0.1
THBS4P35443 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
THBS4P35443 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
THBS4P35443 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
THBS4P35443 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC14.42□□□□□ -0.1
THBS4P35443 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
THBS4P35443 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
THBS4P35443 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
THBS4P35443 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC14.42□□□□□ -0.1
THBS4P35443 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
THBS4P35443 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
THBS4P35443 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
THBS4P35443 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
THBS4P35443 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
THBS4P35443 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
THBS4P35443 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.42□□□□□ -0.1
THBS4P35443 GGT4P-201ENST00000623672 1708 ntBASIC14.42□□□□□ -0.1
THBS4P35443 AC068418.2-201ENST00000577309 3703 ntBASIC14.42□□□□□ -0.1
THBS4P35443 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
THBS4P35443 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC14.42□□□□□ -0.1
THBS4P35443 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
THBS4P35443 CDK2AP2P3-201ENST00000422476 372 ntBASIC14.42□□□□□ -0.1
THBS4P35443 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC14.42□□□□□ -0.1
THBS4P35443 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC14.42□□□□□ -0.1
THBS4P35443 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
THBS4P35443 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC14.42□□□□□ -0.1
THBS4P35443 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC14.42□□□□□ -0.1
THBS4P35443 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
THBS4P35443 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
THBS4P35443 CYP2A7P1-201ENST00000595391 815 ntBASIC14.42□□□□□ -0.1
THBS4P35443 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
THBS4P35443 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
THBS4P35443 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
THBS4P35443 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC14.42□□□□□ -0.1
THBS4P35443 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
THBS4P35443 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
THBS4P35443 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
THBS4P35443 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC14.42□□□□□ -0.1
THBS4P35443 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
THBS4P35443 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC14.42□□□□□ -0.1
THBS4P35443 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC14.42□□□□□ -0.1
THBS4P35443 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC14.42□□□□□ -0.1
THBS4P35443 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
THBS4P35443 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
THBS4P35443 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
THBS4P35443 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC14.42□□□□□ -0.1
THBS4P35443 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
THBS4P35443 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.42□□□□□ -0.1
THBS4P35443 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
THBS4P35443 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.41□□□□□ -0.1
THBS4P35443 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
THBS4P35443 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC14.41□□□□□ -0.1
THBS4P35443 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC14.41□□□□□ -0.1
THBS4P35443 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC14.41□□□□□ -0.1
THBS4P35443 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
THBS4P35443 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.41□□□□□ -0.1
THBS4P35443 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
THBS4P35443 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
THBS4P35443 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
THBS4P35443 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC14.41□□□□□ -0.1
THBS4P35443 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
THBS4P35443 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
THBS4P35443 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC14.41□□□□□ -0.1
THBS4P35443 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC14.41□□□□□ -0.1
THBS4P35443 AC254562.1-201ENST00000417586 456 ntBASIC14.41□□□□□ -0.1
THBS4P35443 AL671277.1-201ENST00000429656 993 ntBASIC14.41□□□□□ -0.1
THBS4P35443 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
THBS4P35443 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC14.41□□□□□ -0.1
THBS4P35443 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC14.41□□□□□ -0.1
THBS4P35443 IGHV3OR16-6-201ENST00000568775 360 ntBASIC14.41□□□□□ -0.1
THBS4P35443 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC14.41□□□□□ -0.1
THBS4P35443 AL009183.1-201ENST00000603760 355 ntBASIC14.41□□□□□ -0.1
THBS4P35443 AC099522.2-201ENST00000607001 744 ntBASIC14.41□□□□□ -0.1
THBS4P35443 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC14.41□□□□□ -0.1
THBS4P35443 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
THBS4P35443 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
THBS4P35443 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
THBS4P35443 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC14.41□□□□□ -0.1
THBS4P35443 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
THBS4P35443 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
THBS4P35443 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
THBS4P35443 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
THBS4P35443 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
THBS4P35443 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
THBS4P35443 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC14.41□□□□□ -0.1
THBS4P35443 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
THBS4P35443 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
THBS4P35443 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
THBS4P35443 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.41□□□□□ -0.1
THBS4P35443 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC14.41□□□□□ -0.1
THBS4P35443 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.41□□□□□ -0.1
THBS4P35443 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
THBS4P35443 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
THBS4P35443 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
THBS4P35443 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
THBS4P35443 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC14.4□□□□□ -0.1
THBS4P35443 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC14.4□□□□□ -0.1
THBS4P35443 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC14.4□□□□□ -0.1
THBS4P35443 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms