Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 RBM39-205ENST00000397370 612 ntTSL 2 BASIC14.06□□□□□ -0.16
CD40P25942 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC14.06□□□□□ -0.16
CD40P25942 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CD40P25942 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC14.06□□□□□ -0.16
CD40P25942 AC004890.2-204ENST00000481968 304 ntBASIC14.06□□□□□ -0.16
CD40P25942 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC14.06□□□□□ -0.16
CD40P25942 MPI-209ENST00000564003 1195 ntTSL 2 BASIC14.06□□□□□ -0.16
CD40P25942 AL133215.2-201ENST00000609242 977 ntBASIC14.06□□□□□ -0.16
CD40P25942 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
CD40P25942 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC14.06□□□□□ -0.16
CD40P25942 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CD40P25942 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.06□□□□□ -0.16
CD40P25942 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CD40P25942 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CD40P25942 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
CD40P25942 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CD40P25942 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
CD40P25942 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC14.06□□□□□ -0.16
CD40P25942 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC14.06□□□□□ -0.16
CD40P25942 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CD40P25942 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CD40P25942 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
CD40P25942 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
CD40P25942 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CD40P25942 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CD40P25942 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CD40P25942 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CD40P25942 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC14.05□□□□□ -0.16
CD40P25942 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CD40P25942 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CD40P25942 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
CD40P25942 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.05□□□□□ -0.16
CD40P25942 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.05□□□□□ -0.16
CD40P25942 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CD40P25942 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CD40P25942 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CD40P25942 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CD40P25942 CALY-203ENST00000368558 825 ntTSL 5 BASIC14.05□□□□□ -0.16
CD40P25942 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC14.05□□□□□ -0.16
CD40P25942 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC14.05□□□□□ -0.16
CD40P25942 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CD40P25942 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CD40P25942 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CD40P25942 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CD40P25942 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC14.05□□□□□ -0.16
CD40P25942 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CD40P25942 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CD40P25942 RPL37AP1-201ENST00000412502 279 ntBASIC14.05□□□□□ -0.16
CD40P25942 TSSK5P-201ENST00000423978 907 ntBASIC14.05□□□□□ -0.16
CD40P25942 UGT1A2P-201ENST00000454886 866 ntBASIC14.05□□□□□ -0.16
CD40P25942 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC14.05□□□□□ -0.16
CD40P25942 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC14.05□□□□□ -0.16
CD40P25942 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CD40P25942 AL079307.3-201ENST00000556114 283 ntBASIC14.05□□□□□ -0.16
CD40P25942 TEX28P1-201ENST00000613479 1221 ntBASIC14.05□□□□□ -0.16
CD40P25942 TEX28P2-201ENST00000617764 1221 ntBASIC14.05□□□□□ -0.16
CD40P25942 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CD40P25942 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.05□□□□□ -0.16
CD40P25942 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
CD40P25942 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CD40P25942 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CD40P25942 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CD40P25942 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CD40P25942 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
CD40P25942 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CD40P25942 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CD40P25942 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CD40P25942 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CD40P25942 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CD40P25942 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CD40P25942 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CD40P25942 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CD40P25942 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CD40P25942 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CD40P25942 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CD40P25942 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CD40P25942 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CD40P25942 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CD40P25942 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
CD40P25942 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC14.04□□□□□ -0.16
CD40P25942 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CD40P25942 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CD40P25942 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CD40P25942 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CD40P25942 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CD40P25942 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CD40P25942 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CD40P25942 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC14.04□□□□□ -0.16
CD40P25942 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CD40P25942 RAC2-204ENST00000406508 893 ntTSL 5 BASIC14.04□□□□□ -0.16
CD40P25942 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC14.04□□□□□ -0.16
CD40P25942 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CD40P25942 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC14.04□□□□□ -0.16
CD40P25942 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC14.04□□□□□ -0.16
CD40P25942 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC14.04□□□□□ -0.16
CD40P25942 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CD40P25942 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CD40P25942 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC14.04□□□□□ -0.16
CD40P25942 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CD40P25942 AC007326.2-201ENST00000624224 7579 ntBASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms