Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
MMP11P24347 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.53■□□□□ 0.08
MMP11P24347 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
MMP11P24347 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC15.53■□□□□ 0.08
MMP11P24347 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC15.53■□□□□ 0.08
MMP11P24347 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
MMP11P24347 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
MMP11P24347 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC15.53■□□□□ 0.08
MMP11P24347 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
MMP11P24347 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
MMP11P24347 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
MMP11P24347 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC15.53■□□□□ 0.08
MMP11P24347 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
MMP11P24347 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC15.53■□□□□ 0.08
MMP11P24347 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC15.53■□□□□ 0.08
MMP11P24347 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC15.53■□□□□ 0.08
MMP11P24347 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC15.53■□□□□ 0.08
MMP11P24347 RNA5SP421-201ENST00000516864 134 ntBASIC15.53■□□□□ 0.08
MMP11P24347 AC105233.2-201ENST00000523697 349 ntBASIC15.53■□□□□ 0.08
MMP11P24347 AF228730.5-201ENST00000530288 346 ntBASIC15.53■□□□□ 0.08
MMP11P24347 DUX4L27-201ENST00000554796 1261 ntBASIC15.53■□□□□ 0.08
MMP11P24347 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC15.53■□□□□ 0.08
MMP11P24347 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC15.53■□□□□ 0.08
MMP11P24347 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC15.53■□□□□ 0.08
MMP11P24347 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
MMP11P24347 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
MMP11P24347 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
MMP11P24347 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.53■□□□□ 0.08
MMP11P24347 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
MMP11P24347 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.53■□□□□ 0.08
MMP11P24347 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.53■□□□□ 0.08
MMP11P24347 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
MMP11P24347 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
MMP11P24347 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
MMP11P24347 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
MMP11P24347 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
MMP11P24347 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15.52■□□□□ 0.08
MMP11P24347 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
MMP11P24347 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
MMP11P24347 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.08
MMP11P24347 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
MMP11P24347 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
MMP11P24347 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
MMP11P24347 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
MMP11P24347 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.52■□□□□ 0.08
MMP11P24347 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC15.52■□□□□ 0.08
MMP11P24347 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
MMP11P24347 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
MMP11P24347 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC15.52■□□□□ 0.08
MMP11P24347 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
MMP11P24347 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
MMP11P24347 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
MMP11P24347 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
MMP11P24347 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
MMP11P24347 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC15.52■□□□□ 0.08
MMP11P24347 AC107890.1-201ENST00000422478 521 ntBASIC15.52■□□□□ 0.08
MMP11P24347 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC15.52■□□□□ 0.08
MMP11P24347 WDR53-203ENST00000429115 683 ntTSL 2 BASIC15.52■□□□□ 0.08
MMP11P24347 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC15.52■□□□□ 0.08
MMP11P24347 BCRP1-201ENST00000444246 691 ntBASIC15.52■□□□□ 0.08
MMP11P24347 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC15.52■□□□□ 0.08
MMP11P24347 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC15.52■□□□□ 0.08
MMP11P24347 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC15.52■□□□□ 0.08
MMP11P24347 AC125807.1-201ENST00000483097 614 ntBASIC15.52■□□□□ 0.08
MMP11P24347 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC15.52■□□□□ 0.08
MMP11P24347 AL138918.1-201ENST00000568306 659 ntBASIC15.52■□□□□ 0.08
MMP11P24347 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
MMP11P24347 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.52■□□□□ 0.07
MMP11P24347 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
MMP11P24347 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
MMP11P24347 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
MMP11P24347 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
MMP11P24347 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
MMP11P24347 AC008677.1-201ENST00000519230 1561 ntBASIC15.52■□□□□ 0.07
MMP11P24347 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
MMP11P24347 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC15.52■□□□□ 0.07
MMP11P24347 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
MMP11P24347 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MMP11P24347 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MMP11P24347 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MMP11P24347 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MMP11P24347 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.51■□□□□ 0.07
MMP11P24347 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
MMP11P24347 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC15.51■□□□□ 0.07
MMP11P24347 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.51■□□□□ 0.07
MMP11P24347 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MMP11P24347 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MMP11P24347 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
MMP11P24347 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
MMP11P24347 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MMP11P24347 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
MMP11P24347 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
MMP11P24347 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.51■□□□□ 0.07
MMP11P24347 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
MMP11P24347 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
MMP11P24347 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC15.51■□□□□ 0.07
MMP11P24347 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
MMP11P24347 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC15.51■□□□□ 0.07
MMP11P24347 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC15.51■□□□□ 0.07
MMP11P24347 AC073389.1-201ENST00000595595 795 ntBASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms