Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC13.88□□□□□ -0.19
VAMP1P23763 AL138966.2-201ENST00000621997 464 ntBASIC13.88□□□□□ -0.19
VAMP1P23763 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC13.88□□□□□ -0.19
VAMP1P23763 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VAMP1P23763 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
VAMP1P23763 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC13.88□□□□□ -0.19
VAMP1P23763 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC13.88□□□□□ -0.19
VAMP1P23763 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VAMP1P23763 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
VAMP1P23763 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
VAMP1P23763 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
VAMP1P23763 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VAMP1P23763 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VAMP1P23763 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VAMP1P23763 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
VAMP1P23763 HNRNPRP1-201ENST00000453465 1695 ntBASIC13.88□□□□□ -0.19
VAMP1P23763 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
VAMP1P23763 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC13.88□□□□□ -0.19
VAMP1P23763 UBC-206ENST00000538617 1303 ntTSL 5 BASIC13.88□□□□□ -0.19
VAMP1P23763 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
VAMP1P23763 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC13.88□□□□□ -0.19
VAMP1P23763 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
VAMP1P23763 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
VAMP1P23763 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
VAMP1P23763 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
VAMP1P23763 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VAMP1P23763 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
VAMP1P23763 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC13.87□□□□□ -0.19
VAMP1P23763 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
VAMP1P23763 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VAMP1P23763 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
VAMP1P23763 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
VAMP1P23763 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC13.87□□□□□ -0.19
VAMP1P23763 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
VAMP1P23763 LINC01568-207ENST00000641790 1380 ntBASIC13.87□□□□□ -0.19
VAMP1P23763 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VAMP1P23763 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
VAMP1P23763 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VAMP1P23763 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC13.87□□□□□ -0.19
VAMP1P23763 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
VAMP1P23763 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC13.87□□□□□ -0.19
VAMP1P23763 SRC-202ENST00000373558 4304 ntTSL 5 BASIC13.87□□□□□ -0.19
VAMP1P23763 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VAMP1P23763 BAALC-202ENST00000306391 243 ntTSL 5 BASIC13.87□□□□□ -0.19
VAMP1P23763 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VAMP1P23763 BAALC-204ENST00000330955 222 ntTSL 5 BASIC13.87□□□□□ -0.19
VAMP1P23763 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
VAMP1P23763 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VAMP1P23763 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VAMP1P23763 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
VAMP1P23763 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC13.87□□□□□ -0.19
VAMP1P23763 TMA16-209ENST00000513272 803 ntTSL 2 BASIC13.87□□□□□ -0.19
VAMP1P23763 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC13.87□□□□□ -0.19
VAMP1P23763 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC13.87□□□□□ -0.19
VAMP1P23763 AC073592.5-201ENST00000624854 528 ntBASIC13.87□□□□□ -0.19
VAMP1P23763 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC13.87□□□□□ -0.19
VAMP1P23763 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VAMP1P23763 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VAMP1P23763 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VAMP1P23763 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
VAMP1P23763 CNTNAP3P2-201ENST00000617175 3861 ntBASIC13.87□□□□□ -0.19
VAMP1P23763 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VAMP1P23763 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VAMP1P23763 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
VAMP1P23763 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
VAMP1P23763 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC13.87□□□□□ -0.19
VAMP1P23763 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VAMP1P23763 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VAMP1P23763 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC13.87□□□□□ -0.19
VAMP1P23763 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
VAMP1P23763 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
VAMP1P23763 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC13.87□□□□□ -0.19
VAMP1P23763 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC13.87□□□□□ -0.19
VAMP1P23763 TPO-203ENST00000346956 2923 ntTSL 5 BASIC13.87□□□□□ -0.19
VAMP1P23763 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VAMP1P23763 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC13.87□□□□□ -0.19
VAMP1P23763 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
VAMP1P23763 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
VAMP1P23763 FAM45BP-202ENST00000592932 1624 ntBASIC13.86□□□□□ -0.19
VAMP1P23763 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VAMP1P23763 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
VAMP1P23763 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
VAMP1P23763 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VAMP1P23763 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
VAMP1P23763 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
VAMP1P23763 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC13.86□□□□□ -0.19
VAMP1P23763 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
VAMP1P23763 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
VAMP1P23763 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC13.86□□□□□ -0.19
VAMP1P23763 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC13.86□□□□□ -0.19
VAMP1P23763 BAALC-201ENST00000297574 801 ntTSL 3 BASIC13.86□□□□□ -0.19
VAMP1P23763 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
VAMP1P23763 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC13.86□□□□□ -0.19
VAMP1P23763 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
VAMP1P23763 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
VAMP1P23763 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC13.86□□□□□ -0.19
VAMP1P23763 SNORA78-201ENST00000459373 127 ntBASIC13.86□□□□□ -0.19
VAMP1P23763 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC13.86□□□□□ -0.19
VAMP1P23763 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC13.86□□□□□ -0.19
VAMP1P23763 AC008550.1-201ENST00000511500 884 ntBASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms