Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC12.61□□□□□ -0.39
RAB4AP20338 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
RAB4AP20338 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
RAB4AP20338 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
RAB4AP20338 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RAB4AP20338 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
RAB4AP20338 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RAB4AP20338 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RAB4AP20338 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RAB4AP20338 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
RAB4AP20338 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC12.6□□□□□ -0.39
RAB4AP20338 SYBU-204ENST00000408908 2983 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
RAB4AP20338 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RAB4AP20338 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
RAB4AP20338 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC12.6□□□□□ -0.39
RAB4AP20338 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC12.6□□□□□ -0.39
RAB4AP20338 RER1-203ENST00000378513 3000 ntTSL 3 BASIC12.6□□□□□ -0.39
RAB4AP20338 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
RAB4AP20338 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC12.6□□□□□ -0.39
RAB4AP20338 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC12.6□□□□□ -0.39
RAB4AP20338 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC12.6□□□□□ -0.39
RAB4AP20338 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RAB4AP20338 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
RAB4AP20338 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC12.6□□□□□ -0.39
RAB4AP20338 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC12.6□□□□□ -0.39
RAB4AP20338 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC12.6□□□□□ -0.39
RAB4AP20338 AC128676.1-201ENST00000454392 318 ntBASIC12.6□□□□□ -0.39
RAB4AP20338 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC12.6□□□□□ -0.39
RAB4AP20338 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC12.6□□□□□ -0.39
RAB4AP20338 GRAP-204ENST00000573099 846 ntTSL 3 BASIC12.6□□□□□ -0.39
RAB4AP20338 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
RAB4AP20338 AP000845.1-201ENST00000581677 2131 ntBASIC12.6□□□□□ -0.39
RAB4AP20338 CD22-209ENST00000594250 2107 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
RAB4AP20338 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC12.6□□□□□ -0.39
RAB4AP20338 REXO1L10P-201ENST00000615707 1290 ntBASIC12.6□□□□□ -0.39
RAB4AP20338 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC12.6□□□□□ -0.39
RAB4AP20338 REXO1L12P-201ENST00000622156 912 ntBASIC12.6□□□□□ -0.39
RAB4AP20338 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC12.6□□□□□ -0.39
RAB4AP20338 AC092865.7-201ENST00000641832 219 ntBASIC12.6□□□□□ -0.39
RAB4AP20338 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RAB4AP20338 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
RAB4AP20338 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RAB4AP20338 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RAB4AP20338 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RAB4AP20338 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
RAB4AP20338 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
RAB4AP20338 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
RAB4AP20338 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RAB4AP20338 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC12.6□□□□□ -0.39
RAB4AP20338 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
RAB4AP20338 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
RAB4AP20338 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
RAB4AP20338 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RAB4AP20338 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RAB4AP20338 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
RAB4AP20338 DLGAP1-201ENST00000315677 6683 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
RAB4AP20338 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
RAB4AP20338 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RAB4AP20338 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC12.59□□□□□ -0.39
RAB4AP20338 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RAB4AP20338 AC011700.1-201ENST00000610409 2627 ntBASIC12.59□□□□□ -0.39
RAB4AP20338 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RAB4AP20338 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
RAB4AP20338 NFATC2-201ENST00000371564 7525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
RAB4AP20338 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RAB4AP20338 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
RAB4AP20338 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
RAB4AP20338 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RAB4AP20338 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
RAB4AP20338 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC12.59□□□□□ -0.39
RAB4AP20338 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RAB4AP20338 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RAB4AP20338 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RAB4AP20338 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
RAB4AP20338 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RAB4AP20338 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RAB4AP20338 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
RAB4AP20338 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RAB4AP20338 DIAPH2-201ENST00000324765 9333 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
RAB4AP20338 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
RAB4AP20338 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
RAB4AP20338 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC12.59□□□□□ -0.39
RAB4AP20338 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
RAB4AP20338 HES2-202ENST00000377836 507 ntTSL 2 BASIC12.59□□□□□ -0.39
RAB4AP20338 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RAB4AP20338 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RAB4AP20338 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC12.59□□□□□ -0.39
RAB4AP20338 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC12.59□□□□□ -0.39
RAB4AP20338 AC002558.1-201ENST00000488906 803 ntBASIC12.59□□□□□ -0.39
RAB4AP20338 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
RAB4AP20338 AP002490.2-201ENST00000524791 560 ntBASIC12.59□□□□□ -0.39
RAB4AP20338 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC12.59□□□□□ -0.39
RAB4AP20338 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC12.59□□□□□ -0.39
RAB4AP20338 TBCB-214ENST00000629269 413 ntTSL 5 BASIC12.59□□□□□ -0.39
RAB4AP20338 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
RAB4AP20338 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC12.59□□□□□ -0.39
RAB4AP20338 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
RAB4AP20338 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RAB4AP20338 AC073957.3-201ENST00000609998 6758 ntBASIC12.59□□□□□ -0.39
RAB4AP20338 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms