Protein–RNA interactions for Protein: P20020

ATP2B1, Plasma membrane calcium-transporting ATPase 1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1P20020 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ATP2B1P20020 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC18.89■□□□□ 0.61
ATP2B1P20020 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ATP2B1P20020 PMS2P4-201ENST00000412466 1052 ntBASIC18.89■□□□□ 0.61
ATP2B1P20020 NMU-202ENST00000505262 693 ntTSL 3 BASIC18.89■□□□□ 0.61
ATP2B1P20020 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC18.89■□□□□ 0.61
ATP2B1P20020 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC18.89■□□□□ 0.61
ATP2B1P20020 PDPK2P-202ENST00000562415 1191 ntBASIC18.89■□□□□ 0.61
ATP2B1P20020 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC18.89■□□□□ 0.61
ATP2B1P20020 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ATP2B1P20020 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
ATP2B1P20020 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ATP2B1P20020 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ATP2B1P20020 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ATP2B1P20020 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ATP2B1P20020 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC18.89■□□□□ 0.61
ATP2B1P20020 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
ATP2B1P20020 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ATP2B1P20020 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATP2B1P20020 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATP2B1P20020 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATP2B1P20020 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATP2B1P20020 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ATP2B1P20020 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATP2B1P20020 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATP2B1P20020 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATP2B1P20020 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATP2B1P20020 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATP2B1P20020 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
ATP2B1P20020 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC18.88■□□□□ 0.61
ATP2B1P20020 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
ATP2B1P20020 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATP2B1P20020 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATP2B1P20020 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATP2B1P20020 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC18.88■□□□□ 0.61
ATP2B1P20020 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATP2B1P20020 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC18.88■□□□□ 0.61
ATP2B1P20020 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATP2B1P20020 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATP2B1P20020 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
ATP2B1P20020 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATP2B1P20020 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATP2B1P20020 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ATP2B1P20020 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ATP2B1P20020 AC140658.5-201ENST00000438532 169 ntBASIC18.88■□□□□ 0.61
ATP2B1P20020 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC18.88■□□□□ 0.61
ATP2B1P20020 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC18.88■□□□□ 0.61
ATP2B1P20020 THTPA-204ENST00000554970 569 ntTSL 4 BASIC18.88■□□□□ 0.61
ATP2B1P20020 THTPA-206ENST00000556015 535 ntTSL 3 BASIC18.88■□□□□ 0.61
ATP2B1P20020 AC068137.2-201ENST00000605408 478 ntBASIC18.88■□□□□ 0.61
ATP2B1P20020 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC18.88■□□□□ 0.61
ATP2B1P20020 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC18.88■□□□□ 0.61
ATP2B1P20020 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATP2B1P20020 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC18.88■□□□□ 0.61
ATP2B1P20020 AGK-211ENST00000629555 2765 ntTSL 5 BASIC18.88■□□□□ 0.61
ATP2B1P20020 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
ATP2B1P20020 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATP2B1P20020 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC18.88■□□□□ 0.61
ATP2B1P20020 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATP2B1P20020 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ATP2B1P20020 LINC01144-201ENST00000626198 1710 ntBASIC18.88■□□□□ 0.61
ATP2B1P20020 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ATP2B1P20020 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATP2B1P20020 AC068418.2-201ENST00000577309 3703 ntBASIC18.88■□□□□ 0.61
ATP2B1P20020 CASK-202ENST00000378158 3848 ntTSL 5 BASIC18.88■□□□□ 0.61
ATP2B1P20020 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
ATP2B1P20020 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATP2B1P20020 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ATP2B1P20020 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATP2B1P20020 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
ATP2B1P20020 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATP2B1P20020 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATP2B1P20020 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ATP2B1P20020 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ATP2B1P20020 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ATP2B1P20020 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
ATP2B1P20020 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
ATP2B1P20020 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ATP2B1P20020 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ATP2B1P20020 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
ATP2B1P20020 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ATP2B1P20020 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
ATP2B1P20020 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ATP2B1P20020 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
ATP2B1P20020 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC18.87■□□□□ 0.61
ATP2B1P20020 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC18.87■□□□□ 0.61
ATP2B1P20020 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
ATP2B1P20020 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ATP2B1P20020 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
ATP2B1P20020 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
ATP2B1P20020 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC18.87■□□□□ 0.61
ATP2B1P20020 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ATP2B1P20020 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
ATP2B1P20020 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ATP2B1P20020 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC18.87■□□□□ 0.61
ATP2B1P20020 PMS2P7-201ENST00000506558 1336 ntBASIC18.87■□□□□ 0.61
ATP2B1P20020 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
ATP2B1P20020 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC18.87■□□□□ 0.61
ATP2B1P20020 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ATP2B1P20020 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms