Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CD58P19256 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CD58P19256 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC17.57■□□□□ 0.4
CD58P19256 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CD58P19256 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC17.57■□□□□ 0.4
CD58P19256 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC17.57■□□□□ 0.4
CD58P19256 AL592309.1-201ENST00000443127 649 ntBASIC17.57■□□□□ 0.4
CD58P19256 AC093724.1-201ENST00000448659 1027 ntBASIC17.57■□□□□ 0.4
CD58P19256 AC004967.1-201ENST00000453589 447 ntBASIC17.57■□□□□ 0.4
CD58P19256 IGHV3-62-201ENST00000520057 340 ntBASIC17.57■□□□□ 0.4
CD58P19256 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC17.57■□□□□ 0.4
CD58P19256 AL596442.2-201ENST00000610240 980 ntBASIC17.57■□□□□ 0.4
CD58P19256 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CD58P19256 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CD58P19256 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.57■□□□□ 0.4
CD58P19256 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CD58P19256 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CD58P19256 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CD58P19256 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CD58P19256 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CD58P19256 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CD58P19256 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CD58P19256 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CD58P19256 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CD58P19256 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CD58P19256 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CD58P19256 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CD58P19256 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CD58P19256 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
CD58P19256 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CD58P19256 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CD58P19256 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
CD58P19256 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.56■□□□□ 0.4
CD58P19256 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CD58P19256 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CD58P19256 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CD58P19256 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CD58P19256 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CD58P19256 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.56■□□□□ 0.4
CD58P19256 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CD58P19256 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CD58P19256 AC004461.1-201ENST00000412461 403 ntBASIC17.56■□□□□ 0.4
CD58P19256 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC17.56■□□□□ 0.4
CD58P19256 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC17.56■□□□□ 0.4
CD58P19256 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CD58P19256 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC17.56■□□□□ 0.4
CD58P19256 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC17.56■□□□□ 0.4
CD58P19256 AL691403.2-201ENST00000618460 490 ntBASIC17.56■□□□□ 0.4
CD58P19256 AC008267.7-201ENST00000624570 1194 ntBASIC17.56■□□□□ 0.4
CD58P19256 FER1L4-210ENST00000615531 5998 ntBASIC17.56■□□□□ 0.4
CD58P19256 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CD58P19256 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CD58P19256 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.56■□□□□ 0.4
CD58P19256 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CD58P19256 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CD58P19256 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CD58P19256 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CD58P19256 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CD58P19256 UXT-AS1-201ENST00000590504 1525 ntBASIC17.56■□□□□ 0.4
CD58P19256 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.56■□□□□ 0.4
CD58P19256 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CD58P19256 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CD58P19256 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.56■□□□□ 0.4
CD58P19256 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CD58P19256 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC17.55■□□□□ 0.4
CD58P19256 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CD58P19256 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
CD58P19256 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CD58P19256 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.55■□□□□ 0.4
CD58P19256 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.55■□□□□ 0.4
CD58P19256 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CD58P19256 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC17.55■□□□□ 0.4
CD58P19256 RELA-227ENST00000615805 2236 ntTSL 5 BASIC17.55■□□□□ 0.4
CD58P19256 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CD58P19256 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CD58P19256 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CD58P19256 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CD58P19256 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CD58P19256 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CD58P19256 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CD58P19256 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CD58P19256 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC17.55■□□□□ 0.4
CD58P19256 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CD58P19256 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.55■□□□□ 0.4
CD58P19256 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CD58P19256 AC069335.1-201ENST00000489972 472 ntBASIC17.55■□□□□ 0.4
CD58P19256 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC17.55■□□□□ 0.4
CD58P19256 AL513210.1-201ENST00000629608 234 ntBASIC17.55■□□□□ 0.4
CD58P19256 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC17.55■□□□□ 0.4
CD58P19256 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CD58P19256 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC17.55■□□□□ 0.4
CD58P19256 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC17.55■□□□□ 0.4
CD58P19256 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC17.55■□□□□ 0.4
CD58P19256 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CD58P19256 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.55■□□□□ 0.4
CD58P19256 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CD58P19256 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CD58P19256 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CD58P19256 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CD58P19256 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms