Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DOBP13765 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DOBP13765 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.67□□□□□ -0.06
HLA-DOBP13765 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DOBP13765 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC14.67□□□□□ -0.06
HLA-DOBP13765 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.67□□□□□ -0.06
HLA-DOBP13765 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DOBP13765 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DOBP13765 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC14.67□□□□□ -0.06
HLA-DOBP13765 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DOBP13765 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DOBP13765 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DOBP13765 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DOBP13765 FABP5-202ENST00000396359 986 ntTSL 5 BASIC14.67□□□□□ -0.06
HLA-DOBP13765 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DOBP13765 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC14.67□□□□□ -0.06
HLA-DOBP13765 AC093724.1-201ENST00000448659 1027 ntBASIC14.67□□□□□ -0.06
HLA-DOBP13765 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DOBP13765 AC112191.1-201ENST00000523689 701 ntBASIC14.67□□□□□ -0.06
HLA-DOBP13765 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC14.67□□□□□ -0.06
HLA-DOBP13765 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC14.67□□□□□ -0.06
HLA-DOBP13765 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC14.67□□□□□ -0.06
HLA-DOBP13765 AL161645.1-201ENST00000622716 1255 ntBASIC14.67□□□□□ -0.06
HLA-DOBP13765 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
HLA-DOBP13765 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DOBP13765 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.67□□□□□ -0.06
HLA-DOBP13765 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DOBP13765 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.67□□□□□ -0.06
HLA-DOBP13765 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC14.67□□□□□ -0.06
HLA-DOBP13765 AC073439.1-201ENST00000624121 1774 ntBASIC14.67□□□□□ -0.06
HLA-DOBP13765 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DOBP13765 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DOBP13765 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DOBP13765 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DOBP13765 AC024909.3-201ENST00000611513 2257 ntBASIC14.67□□□□□ -0.06
HLA-DOBP13765 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DOBP13765 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.67□□□□□ -0.06
HLA-DOBP13765 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DOBP13765 AC010491.1-201ENST00000563101 2797 ntBASIC14.67□□□□□ -0.06
HLA-DOBP13765 AC132872.4-202ENST00000622924 2756 ntBASIC14.67□□□□□ -0.06
HLA-DOBP13765 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DOBP13765 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DOBP13765 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
HLA-DOBP13765 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC14.66□□□□□ -0.06
HLA-DOBP13765 AL592424.1-201ENST00000563624 1536 ntBASIC14.66□□□□□ -0.06
HLA-DOBP13765 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.66□□□□□ -0.06
HLA-DOBP13765 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DOBP13765 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
HLA-DOBP13765 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
HLA-DOBP13765 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DOBP13765 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC14.66□□□□□ -0.06
HLA-DOBP13765 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DOBP13765 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC14.66□□□□□ -0.06
HLA-DOBP13765 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DOBP13765 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DOBP13765 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DOBP13765 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DOBP13765 NARF-206ENST00000457415 1668 ntTSL 5 BASIC14.66□□□□□ -0.06
HLA-DOBP13765 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
HLA-DOBP13765 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DOBP13765 FAM58CP-201ENST00000435741 640 ntBASIC14.66□□□□□ -0.06
HLA-DOBP13765 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DOBP13765 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
HLA-DOBP13765 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC14.66□□□□□ -0.06
HLA-DOBP13765 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC14.66□□□□□ -0.06
HLA-DOBP13765 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14.66□□□□□ -0.06
HLA-DOBP13765 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC14.66□□□□□ -0.06
HLA-DOBP13765 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DOBP13765 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DOBP13765 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DOBP13765 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DOBP13765 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DOBP13765 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DOBP13765 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.66□□□□□ -0.06
HLA-DOBP13765 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DOBP13765 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
HLA-DOBP13765 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DOBP13765 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DOBP13765 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DOBP13765 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HLA-DOBP13765 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC14.66□□□□□ -0.06
HLA-DOBP13765 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DOBP13765 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC14.65□□□□□ -0.06
HLA-DOBP13765 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DOBP13765 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DOBP13765 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DOBP13765 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DOBP13765 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DOBP13765 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
HLA-DOBP13765 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.65□□□□□ -0.06
HLA-DOBP13765 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC14.65□□□□□ -0.06
HLA-DOBP13765 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DOBP13765 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.65□□□□□ -0.06
HLA-DOBP13765 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DOBP13765 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC14.65□□□□□ -0.06
HLA-DOBP13765 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DOBP13765 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HLA-DOBP13765 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC14.65□□□□□ -0.06
HLA-DOBP13765 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
HLA-DOBP13765 AC002347.1-201ENST00000569543 541 ntBASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms