Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC18.27■□□□□ 0.51
COL11A1P12107 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
COL11A1P12107 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
COL11A1P12107 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
COL11A1P12107 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
COL11A1P12107 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC18.26■□□□□ 0.51
COL11A1P12107 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
COL11A1P12107 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC18.26■□□□□ 0.51
COL11A1P12107 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
COL11A1P12107 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
COL11A1P12107 CROCCP4-201ENST00000457096 498 ntBASIC18.26■□□□□ 0.51
COL11A1P12107 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC18.26■□□□□ 0.51
COL11A1P12107 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
COL11A1P12107 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC18.26■□□□□ 0.51
COL11A1P12107 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC18.26■□□□□ 0.51
COL11A1P12107 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC18.26■□□□□ 0.51
COL11A1P12107 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC18.26■□□□□ 0.51
COL11A1P12107 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC18.26■□□□□ 0.51
COL11A1P12107 AP001282.1-201ENST00000531301 1499 ntBASIC18.26■□□□□ 0.51
COL11A1P12107 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC18.26■□□□□ 0.51
COL11A1P12107 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL11A1P12107 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
COL11A1P12107 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL11A1P12107 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
COL11A1P12107 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC18.26■□□□□ 0.51
COL11A1P12107 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
COL11A1P12107 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL11A1P12107 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL11A1P12107 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL11A1P12107 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL11A1P12107 LRRFIP1P1-201ENST00000498774 2246 ntBASIC18.26■□□□□ 0.51
COL11A1P12107 PDIA3P1-201ENST00000471856 1510 ntBASIC18.26■□□□□ 0.51
COL11A1P12107 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
COL11A1P12107 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL11A1P12107 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC18.26■□□□□ 0.51
COL11A1P12107 HNRNPA1P48-201ENST00000562726 1377 ntBASIC18.26■□□□□ 0.51
COL11A1P12107 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC18.26■□□□□ 0.51
COL11A1P12107 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC18.26■□□□□ 0.51
COL11A1P12107 AC136604.1-201ENST00000418535 575 ntBASIC18.26■□□□□ 0.51
COL11A1P12107 PHKG1P2-201ENST00000457537 863 ntBASIC18.26■□□□□ 0.51
COL11A1P12107 FTH1P14-201ENST00000482930 551 ntBASIC18.26■□□□□ 0.51
COL11A1P12107 SLED1-202ENST00000512051 380 ntBASIC18.26■□□□□ 0.51
COL11A1P12107 AC092552.1-201ENST00000547243 906 ntBASIC18.26■□□□□ 0.51
COL11A1P12107 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL11A1P12107 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL11A1P12107 ZBTB45P2-201ENST00000452245 1531 ntBASIC18.25■□□□□ 0.51
COL11A1P12107 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL11A1P12107 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL11A1P12107 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL11A1P12107 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL11A1P12107 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
COL11A1P12107 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
COL11A1P12107 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
COL11A1P12107 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
COL11A1P12107 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
COL11A1P12107 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL11A1P12107 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC18.25■□□□□ 0.51
COL11A1P12107 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL11A1P12107 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
COL11A1P12107 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC18.25■□□□□ 0.51
COL11A1P12107 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL11A1P12107 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC18.25■□□□□ 0.51
COL11A1P12107 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL11A1P12107 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL11A1P12107 NSL1-201ENST00000366976 722 ntTSL 2 BASIC18.25■□□□□ 0.51
COL11A1P12107 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC18.25■□□□□ 0.51
COL11A1P12107 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
COL11A1P12107 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
COL11A1P12107 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC18.25■□□□□ 0.51
COL11A1P12107 AC104596.2-201ENST00000512793 793 ntBASIC18.25■□□□□ 0.51
COL11A1P12107 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
COL11A1P12107 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC18.25■□□□□ 0.51
COL11A1P12107 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC18.25■□□□□ 0.51
COL11A1P12107 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC18.25■□□□□ 0.51
COL11A1P12107 AL450472.2-201ENST00000603663 1156 ntBASIC18.25■□□□□ 0.51
COL11A1P12107 AL512343.1-201ENST00000605837 169 ntBASIC18.25■□□□□ 0.51
COL11A1P12107 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC18.25■□□□□ 0.51
COL11A1P12107 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
COL11A1P12107 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
COL11A1P12107 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC18.25■□□□□ 0.51
COL11A1P12107 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL11A1P12107 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
COL11A1P12107 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL11A1P12107 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL11A1P12107 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
COL11A1P12107 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL11A1P12107 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
COL11A1P12107 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL11A1P12107 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
COL11A1P12107 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
COL11A1P12107 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
COL11A1P12107 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
COL11A1P12107 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
COL11A1P12107 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL11A1P12107 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
COL11A1P12107 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL11A1P12107 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL11A1P12107 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC18.24■□□□□ 0.51
COL11A1P12107 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
COL11A1P12107 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms