Protein–RNA interactions for Protein: P0DP08

IGHV4-38-2, Immunoglobulin heavy variable 4-38-2, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-38-2P0DP08 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
IGHV4-38-2P0DP08 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC13.14□□□□□ -0.31
IGHV4-38-2P0DP08 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
IGHV4-38-2P0DP08 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
IGHV4-38-2P0DP08 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
IGHV4-38-2P0DP08 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
IGHV4-38-2P0DP08 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
IGHV4-38-2P0DP08 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
IGHV4-38-2P0DP08 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
IGHV4-38-2P0DP08 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
IGHV4-38-2P0DP08 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
IGHV4-38-2P0DP08 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
IGHV4-38-2P0DP08 GRAP-202ENST00000395635 834 ntTSL 2 BASIC13.14□□□□□ -0.31
IGHV4-38-2P0DP08 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
IGHV4-38-2P0DP08 SPDYE17-201ENST00000412399 783 ntBASIC13.14□□□□□ -0.31
IGHV4-38-2P0DP08 GAPDHP21-201ENST00000450301 1010 ntBASIC13.14□□□□□ -0.31
IGHV4-38-2P0DP08 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
IGHV4-38-2P0DP08 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC13.14□□□□□ -0.31
IGHV4-38-2P0DP08 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
IGHV4-38-2P0DP08 ZNF890P-202ENST00000530367 1156 ntBASIC13.14□□□□□ -0.31
IGHV4-38-2P0DP08 COQ6-210ENST00000554920 649 ntTSL 3 BASIC13.14□□□□□ -0.31
IGHV4-38-2P0DP08 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC13.14□□□□□ -0.31
IGHV4-38-2P0DP08 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC13.14□□□□□ -0.31
IGHV4-38-2P0DP08 AL358472.5-202ENST00000641448 1267 ntBASIC13.14□□□□□ -0.31
IGHV4-38-2P0DP08 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
IGHV4-38-2P0DP08 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
IGHV4-38-2P0DP08 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC13.14□□□□□ -0.31
IGHV4-38-2P0DP08 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
IGHV4-38-2P0DP08 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
IGHV4-38-2P0DP08 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
IGHV4-38-2P0DP08 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
IGHV4-38-2P0DP08 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
IGHV4-38-2P0DP08 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
IGHV4-38-2P0DP08 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
IGHV4-38-2P0DP08 AC092171.3-201ENST00000610122 2651 ntBASIC13.14□□□□□ -0.31
IGHV4-38-2P0DP08 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
IGHV4-38-2P0DP08 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
IGHV4-38-2P0DP08 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
IGHV4-38-2P0DP08 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
IGHV4-38-2P0DP08 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
IGHV4-38-2P0DP08 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
IGHV4-38-2P0DP08 F11R-206ENST00000621309 4770 ntTSL 5 BASIC13.13□□□□□ -0.31
IGHV4-38-2P0DP08 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
IGHV4-38-2P0DP08 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
IGHV4-38-2P0DP08 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
IGHV4-38-2P0DP08 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC13.13□□□□□ -0.31
IGHV4-38-2P0DP08 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
IGHV4-38-2P0DP08 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC13.13□□□□□ -0.31
IGHV4-38-2P0DP08 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
IGHV4-38-2P0DP08 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
IGHV4-38-2P0DP08 AC022211.2-201ENST00000585075 2527 ntBASIC13.13□□□□□ -0.31
IGHV4-38-2P0DP08 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
IGHV4-38-2P0DP08 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
IGHV4-38-2P0DP08 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
IGHV4-38-2P0DP08 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
IGHV4-38-2P0DP08 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
IGHV4-38-2P0DP08 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC13.13□□□□□ -0.31
IGHV4-38-2P0DP08 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC13.13□□□□□ -0.31
IGHV4-38-2P0DP08 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC13.13□□□□□ -0.31
IGHV4-38-2P0DP08 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC13.13□□□□□ -0.31
IGHV4-38-2P0DP08 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
IGHV4-38-2P0DP08 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
IGHV4-38-2P0DP08 RASL12-203ENST00000434605 982 ntTSL 2 BASIC13.13□□□□□ -0.31
IGHV4-38-2P0DP08 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC13.13□□□□□ -0.31
IGHV4-38-2P0DP08 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC13.13□□□□□ -0.31
IGHV4-38-2P0DP08 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
IGHV4-38-2P0DP08 AL596325.1-201ENST00000563991 1082 ntBASIC13.13□□□□□ -0.31
IGHV4-38-2P0DP08 PAM16-215ENST00000577031 548 ntTSL 4 BASIC13.13□□□□□ -0.31
IGHV4-38-2P0DP08 AC004790.1-201ENST00000612686 536 ntBASIC13.13□□□□□ -0.31
IGHV4-38-2P0DP08 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
IGHV4-38-2P0DP08 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
IGHV4-38-2P0DP08 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC13.13□□□□□ -0.31
IGHV4-38-2P0DP08 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC13.13□□□□□ -0.31
IGHV4-38-2P0DP08 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC13.13□□□□□ -0.31
IGHV4-38-2P0DP08 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
IGHV4-38-2P0DP08 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
IGHV4-38-2P0DP08 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
IGHV4-38-2P0DP08 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
IGHV4-38-2P0DP08 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
IGHV4-38-2P0DP08 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
IGHV4-38-2P0DP08 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC13.13□□□□□ -0.31
IGHV4-38-2P0DP08 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
IGHV4-38-2P0DP08 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
IGHV4-38-2P0DP08 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC13.13□□□□□ -0.31
IGHV4-38-2P0DP08 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
IGHV4-38-2P0DP08 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC13.13□□□□□ -0.31
IGHV4-38-2P0DP08 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC13.13□□□□□ -0.31
IGHV4-38-2P0DP08 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
IGHV4-38-2P0DP08 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
IGHV4-38-2P0DP08 AC005052.1-201ENST00000625181 2492 ntBASIC13.13□□□□□ -0.31
IGHV4-38-2P0DP08 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC13.13□□□□□ -0.31
IGHV4-38-2P0DP08 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC13.13□□□□□ -0.31
IGHV4-38-2P0DP08 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
IGHV4-38-2P0DP08 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
IGHV4-38-2P0DP08 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
IGHV4-38-2P0DP08 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
IGHV4-38-2P0DP08 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
IGHV4-38-2P0DP08 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
IGHV4-38-2P0DP08 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
IGHV4-38-2P0DP08 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms