Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HMGN1P05114 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
HMGN1P05114 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
HMGN1P05114 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HMGN1P05114 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HMGN1P05114 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HMGN1P05114 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HMGN1P05114 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HMGN1P05114 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HMGN1P05114 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
HMGN1P05114 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC14.87□□□□□ -0.03
HMGN1P05114 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.87□□□□□ -0.03
HMGN1P05114 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
HMGN1P05114 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HMGN1P05114 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
HMGN1P05114 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
HMGN1P05114 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HMGN1P05114 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HMGN1P05114 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HMGN1P05114 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.87□□□□□ -0.03
HMGN1P05114 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
HMGN1P05114 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC14.87□□□□□ -0.03
HMGN1P05114 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC14.87□□□□□ -0.03
HMGN1P05114 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HMGN1P05114 COPS8-203ENST00000409334 794 ntTSL 5 BASIC14.87□□□□□ -0.03
HMGN1P05114 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC14.87□□□□□ -0.03
HMGN1P05114 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HMGN1P05114 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.87□□□□□ -0.03
HMGN1P05114 AC006557.2-201ENST00000592985 1240 ntBASIC14.87□□□□□ -0.03
HMGN1P05114 AL732292.2-201ENST00000609649 430 ntBASIC14.87□□□□□ -0.03
HMGN1P05114 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC14.87□□□□□ -0.03
HMGN1P05114 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HMGN1P05114 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.87□□□□□ -0.03
HMGN1P05114 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
HMGN1P05114 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC14.87□□□□□ -0.03
HMGN1P05114 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HMGN1P05114 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.87□□□□□ -0.03
HMGN1P05114 AC099063.4-201ENST00000641099 1602 ntBASIC14.87□□□□□ -0.03
HMGN1P05114 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HMGN1P05114 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HMGN1P05114 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
HMGN1P05114 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC14.87□□□□□ -0.03
HMGN1P05114 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.87□□□□□ -0.03
HMGN1P05114 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.87□□□□□ -0.03
HMGN1P05114 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
HMGN1P05114 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HMGN1P05114 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HMGN1P05114 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.86□□□□□ -0.03
HMGN1P05114 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.86□□□□□ -0.03
HMGN1P05114 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.86□□□□□ -0.03
HMGN1P05114 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
HMGN1P05114 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
HMGN1P05114 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HMGN1P05114 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HMGN1P05114 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.86□□□□□ -0.03
HMGN1P05114 AC005622.1-201ENST00000636801 1703 ntBASIC14.86□□□□□ -0.03
HMGN1P05114 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.86□□□□□ -0.03
HMGN1P05114 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HMGN1P05114 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HMGN1P05114 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
HMGN1P05114 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HMGN1P05114 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HMGN1P05114 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC14.86□□□□□ -0.03
HMGN1P05114 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
HMGN1P05114 ARMC10P1-201ENST00000313754 855 ntBASIC14.86□□□□□ -0.03
HMGN1P05114 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC14.86□□□□□ -0.03
HMGN1P05114 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
HMGN1P05114 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC14.86□□□□□ -0.03
HMGN1P05114 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC14.86□□□□□ -0.03
HMGN1P05114 FOSL1P1-201ENST00000511041 816 ntBASIC14.86□□□□□ -0.03
HMGN1P05114 SART3-203ENST00000546611 1184 ntBASIC14.86□□□□□ -0.03
HMGN1P05114 AC091076.1-201ENST00000610741 619 ntBASIC14.86□□□□□ -0.03
HMGN1P05114 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC14.86□□□□□ -0.03
HMGN1P05114 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC14.86□□□□□ -0.03
HMGN1P05114 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
HMGN1P05114 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC14.86□□□□□ -0.03
HMGN1P05114 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.86□□□□□ -0.03
HMGN1P05114 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HMGN1P05114 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HMGN1P05114 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.86□□□□□ -0.03
HMGN1P05114 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.86□□□□□ -0.03
HMGN1P05114 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HMGN1P05114 AC006504.4-201ENST00000592118 1568 ntBASIC14.85□□□□□ -0.03
HMGN1P05114 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.85□□□□□ -0.03
HMGN1P05114 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.85□□□□□ -0.03
HMGN1P05114 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMGN1P05114 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMGN1P05114 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.85□□□□□ -0.03
HMGN1P05114 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMGN1P05114 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMGN1P05114 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.85□□□□□ -0.03
HMGN1P05114 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
HMGN1P05114 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMGN1P05114 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
HMGN1P05114 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMGN1P05114 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMGN1P05114 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMGN1P05114 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
HMGN1P05114 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.85□□□□□ -0.03
HMGN1P05114 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms