Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
KRT6AP02538 AL049840.3-201ENST00000602669 611 ntBASIC15.9■□□□□ 0.14
KRT6AP02538 AC104692.2-201ENST00000603054 253 ntBASIC15.9■□□□□ 0.14
KRT6AP02538 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC15.9■□□□□ 0.14
KRT6AP02538 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC15.9■□□□□ 0.14
KRT6AP02538 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.9■□□□□ 0.14
KRT6AP02538 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
KRT6AP02538 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
KRT6AP02538 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
KRT6AP02538 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.9■□□□□ 0.14
KRT6AP02538 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
KRT6AP02538 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
KRT6AP02538 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
KRT6AP02538 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
KRT6AP02538 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
KRT6AP02538 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.9■□□□□ 0.14
KRT6AP02538 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
KRT6AP02538 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
KRT6AP02538 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.9■□□□□ 0.14
KRT6AP02538 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
KRT6AP02538 NORAD-201ENST00000565493 5339 ntBASIC15.9■□□□□ 0.14
KRT6AP02538 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
KRT6AP02538 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
KRT6AP02538 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
KRT6AP02538 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.89■□□□□ 0.14
KRT6AP02538 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
KRT6AP02538 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
KRT6AP02538 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
KRT6AP02538 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC15.89■□□□□ 0.13
KRT6AP02538 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
KRT6AP02538 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
KRT6AP02538 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
KRT6AP02538 U82695.1-201ENST00000635752 1889 ntBASIC15.89■□□□□ 0.13
KRT6AP02538 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
KRT6AP02538 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
KRT6AP02538 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.89■□□□□ 0.13
KRT6AP02538 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.89■□□□□ 0.13
KRT6AP02538 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
KRT6AP02538 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC15.89■□□□□ 0.13
KRT6AP02538 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
KRT6AP02538 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
KRT6AP02538 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
KRT6AP02538 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
KRT6AP02538 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC15.89■□□□□ 0.13
KRT6AP02538 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
KRT6AP02538 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC15.89■□□□□ 0.13
KRT6AP02538 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC15.89■□□□□ 0.13
KRT6AP02538 UNC93B6-202ENST00000528242 690 ntBASIC15.89■□□□□ 0.13
KRT6AP02538 POLD4-207ENST00000531239 584 ntTSL 2 BASIC15.89■□□□□ 0.13
KRT6AP02538 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC15.89■□□□□ 0.13
KRT6AP02538 AP001005.1-201ENST00000571755 1248 ntBASIC15.89■□□□□ 0.13
KRT6AP02538 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.89■□□□□ 0.13
KRT6AP02538 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC15.89■□□□□ 0.13
KRT6AP02538 AC116407.3-201ENST00000623905 1129 ntBASIC15.89■□□□□ 0.13
KRT6AP02538 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
KRT6AP02538 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
KRT6AP02538 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
KRT6AP02538 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
KRT6AP02538 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
KRT6AP02538 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.89■□□□□ 0.13
KRT6AP02538 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
KRT6AP02538 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
KRT6AP02538 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
KRT6AP02538 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
KRT6AP02538 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
KRT6AP02538 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC15.89■□□□□ 0.13
KRT6AP02538 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
KRT6AP02538 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
KRT6AP02538 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
KRT6AP02538 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
KRT6AP02538 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
KRT6AP02538 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.89■□□□□ 0.13
KRT6AP02538 AL592424.1-201ENST00000563624 1536 ntBASIC15.89■□□□□ 0.13
KRT6AP02538 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
KRT6AP02538 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.88■□□□□ 0.13
KRT6AP02538 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
KRT6AP02538 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
KRT6AP02538 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
KRT6AP02538 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
KRT6AP02538 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.88■□□□□ 0.13
KRT6AP02538 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
KRT6AP02538 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC15.88■□□□□ 0.13
KRT6AP02538 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
KRT6AP02538 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
KRT6AP02538 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
KRT6AP02538 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
KRT6AP02538 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
KRT6AP02538 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
KRT6AP02538 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
KRT6AP02538 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.88■□□□□ 0.13
KRT6AP02538 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.88■□□□□ 0.13
KRT6AP02538 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
KRT6AP02538 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
KRT6AP02538 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
KRT6AP02538 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
KRT6AP02538 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
KRT6AP02538 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
KRT6AP02538 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC15.88■□□□□ 0.13
KRT6AP02538 MIR648-201ENST00000385046 94 ntBASIC15.88■□□□□ 0.13
KRT6AP02538 CSF3-203ENST00000394148 622 ntTSL 3 BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms