Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
COL1A1P02452 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
COL1A1P02452 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL1A1P02452 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
COL1A1P02452 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC19.43■□□□□ 0.7
COL1A1P02452 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
COL1A1P02452 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
COL1A1P02452 KRT8P37-201ENST00000451609 1420 ntBASIC19.43■□□□□ 0.7
COL1A1P02452 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
COL1A1P02452 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
COL1A1P02452 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL1A1P02452 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
COL1A1P02452 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
COL1A1P02452 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL1A1P02452 AC134407.2-201ENST00000625089 1978 ntBASIC19.43■□□□□ 0.7
COL1A1P02452 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL1A1P02452 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC19.42■□□□□ 0.7
COL1A1P02452 GRN-214ENST00000589265 1632 ntTSL 5 BASIC19.42■□□□□ 0.7
COL1A1P02452 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL1A1P02452 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC19.42■□□□□ 0.7
COL1A1P02452 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL1A1P02452 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL1A1P02452 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC19.42■□□□□ 0.7
COL1A1P02452 MIR658-201ENST00000385210 100 ntBASIC19.42■□□□□ 0.7
COL1A1P02452 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC19.42■□□□□ 0.7
COL1A1P02452 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC19.42■□□□□ 0.7
COL1A1P02452 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC19.42■□□□□ 0.7
COL1A1P02452 RRP7BP-205ENST00000566851 833 ntBASIC19.42■□□□□ 0.7
COL1A1P02452 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC19.42■□□□□ 0.7
COL1A1P02452 AL158212.4-201ENST00000624062 1286 ntBASIC19.42■□□□□ 0.7
COL1A1P02452 NKILA-202ENST00000614771 2598 ntBASIC19.42■□□□□ 0.7
COL1A1P02452 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL1A1P02452 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL1A1P02452 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL1A1P02452 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC19.42■□□□□ 0.7
COL1A1P02452 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC19.42■□□□□ 0.7
COL1A1P02452 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
COL1A1P02452 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
COL1A1P02452 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
COL1A1P02452 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL1A1P02452 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL1A1P02452 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC19.42■□□□□ 0.7
COL1A1P02452 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
COL1A1P02452 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL1A1P02452 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
COL1A1P02452 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC19.41■□□□□ 0.7
COL1A1P02452 ELK1P1-201ENST00000485699 580 ntBASIC19.41■□□□□ 0.7
COL1A1P02452 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC19.41■□□□□ 0.7
COL1A1P02452 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
COL1A1P02452 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL1A1P02452 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC19.41■□□□□ 0.7
COL1A1P02452 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC19.41■□□□□ 0.7
COL1A1P02452 MIR6799-201ENST00000620297 69 ntBASIC19.41■□□□□ 0.7
COL1A1P02452 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL1A1P02452 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL1A1P02452 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
COL1A1P02452 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
COL1A1P02452 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC19.41■□□□□ 0.7
COL1A1P02452 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
COL1A1P02452 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
COL1A1P02452 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL1A1P02452 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
COL1A1P02452 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
COL1A1P02452 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
COL1A1P02452 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL1A1P02452 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC19.41■□□□□ 0.7
COL1A1P02452 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
COL1A1P02452 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC19.41■□□□□ 0.7
COL1A1P02452 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL1A1P02452 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL1A1P02452 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
COL1A1P02452 AC004987.2-201ENST00000395959 1148 ntBASIC19.41■□□□□ 0.7
COL1A1P02452 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
COL1A1P02452 FO393414.2-201ENST00000405153 598 ntBASIC19.41■□□□□ 0.7
COL1A1P02452 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL1A1P02452 RPL13P2-201ENST00000440687 659 ntBASIC19.41■□□□□ 0.7
COL1A1P02452 FXR1-221ENST00000491674 365 ntTSL 2 BASIC19.41■□□□□ 0.7
COL1A1P02452 NEU3-203ENST00000529024 581 ntTSL 3 BASIC19.41■□□□□ 0.7
COL1A1P02452 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC19.41■□□□□ 0.7
COL1A1P02452 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC19.41■□□□□ 0.7
COL1A1P02452 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC19.41■□□□□ 0.7
COL1A1P02452 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC19.41■□□□□ 0.7
COL1A1P02452 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
COL1A1P02452 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC19.41■□□□□ 0.7
COL1A1P02452 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC19.41■□□□□ 0.7
COL1A1P02452 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
COL1A1P02452 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
COL1A1P02452 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL1A1P02452 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL1A1P02452 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL1A1P02452 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL1A1P02452 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
COL1A1P02452 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL1A1P02452 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL1A1P02452 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL1A1P02452 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL1A1P02452 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
COL1A1P02452 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
COL1A1P02452 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL1A1P02452 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms