Protein–RNA interactions for Protein: P01850

TRBC1, T-cell receptor beta-1 chain C region, humanhuman

Predictions only

Length 177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBC1P01850 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.36■□□□□ 0.21
TRBC1P01850 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
TRBC1P01850 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRBC1P01850 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRBC1P01850 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRBC1P01850 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRBC1P01850 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRBC1P01850 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.36■□□□□ 0.21
TRBC1P01850 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRBC1P01850 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRBC1P01850 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.35■□□□□ 0.21
TRBC1P01850 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
TRBC1P01850 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRBC1P01850 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRBC1P01850 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRBC1P01850 PCDHB19P-201ENST00000570871 2371 ntBASIC16.35■□□□□ 0.21
TRBC1P01850 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRBC1P01850 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRBC1P01850 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.35■□□□□ 0.21
TRBC1P01850 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRBC1P01850 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
TRBC1P01850 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRBC1P01850 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
TRBC1P01850 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRBC1P01850 METTL21AP1-201ENST00000438852 635 ntBASIC16.35■□□□□ 0.21
TRBC1P01850 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRBC1P01850 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.35■□□□□ 0.21
TRBC1P01850 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC16.35■□□□□ 0.21
TRBC1P01850 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRBC1P01850 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRBC1P01850 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRBC1P01850 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRBC1P01850 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRBC1P01850 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.35■□□□□ 0.21
TRBC1P01850 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.35■□□□□ 0.21
TRBC1P01850 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC16.35■□□□□ 0.21
TRBC1P01850 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
TRBC1P01850 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRBC1P01850 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRBC1P01850 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRBC1P01850 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRBC1P01850 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRBC1P01850 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRBC1P01850 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRBC1P01850 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRBC1P01850 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRBC1P01850 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRBC1P01850 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRBC1P01850 MTHFR-217ENST00000641820 1569 ntBASIC16.34■□□□□ 0.21
TRBC1P01850 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRBC1P01850 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRBC1P01850 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
TRBC1P01850 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
TRBC1P01850 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.34■□□□□ 0.21
TRBC1P01850 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.34■□□□□ 0.21
TRBC1P01850 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
TRBC1P01850 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.34■□□□□ 0.21
TRBC1P01850 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRBC1P01850 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRBC1P01850 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRBC1P01850 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRBC1P01850 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRBC1P01850 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRBC1P01850 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRBC1P01850 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.34■□□□□ 0.21
TRBC1P01850 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.34■□□□□ 0.21
TRBC1P01850 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC16.34■□□□□ 0.21
TRBC1P01850 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRBC1P01850 MIR4321-201ENST00000592276 80 ntBASIC16.34■□□□□ 0.21
TRBC1P01850 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.34■□□□□ 0.21
TRBC1P01850 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC16.34■□□□□ 0.21
TRBC1P01850 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC16.34■□□□□ 0.21
TRBC1P01850 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.34■□□□□ 0.21
TRBC1P01850 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.34■□□□□ 0.21
TRBC1P01850 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRBC1P01850 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
TRBC1P01850 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRBC1P01850 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.34■□□□□ 0.21
TRBC1P01850 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRBC1P01850 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.34■□□□□ 0.21
TRBC1P01850 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRBC1P01850 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.34■□□□□ 0.21
TRBC1P01850 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRBC1P01850 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRBC1P01850 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.34■□□□□ 0.21
TRBC1P01850 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
TRBC1P01850 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
TRBC1P01850 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRBC1P01850 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRBC1P01850 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.33■□□□□ 0.21
TRBC1P01850 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRBC1P01850 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRBC1P01850 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRBC1P01850 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRBC1P01850 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.33■□□□□ 0.2
TRBC1P01850 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRBC1P01850 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRBC1P01850 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRBC1P01850 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRBC1P01850 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms