Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC13□□□□□ -0.33
IFNA1P01562 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC13□□□□□ -0.33
IFNA1P01562 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
IFNA1P01562 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
IFNA1P01562 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC13□□□□□ -0.33
IFNA1P01562 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
IFNA1P01562 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
IFNA1P01562 AC087481.3-201ENST00000602886 1894 ntBASIC12.99□□□□□ -0.33
IFNA1P01562 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC12.99□□□□□ -0.33
IFNA1P01562 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
IFNA1P01562 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
IFNA1P01562 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
IFNA1P01562 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC12.99□□□□□ -0.33
IFNA1P01562 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
IFNA1P01562 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
IFNA1P01562 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
IFNA1P01562 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
IFNA1P01562 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
IFNA1P01562 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
IFNA1P01562 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
IFNA1P01562 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC12.99□□□□□ -0.33
IFNA1P01562 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC12.99□□□□□ -0.33
IFNA1P01562 KRT8P10-201ENST00000450021 1447 ntBASIC12.99□□□□□ -0.33
IFNA1P01562 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
IFNA1P01562 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
IFNA1P01562 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
IFNA1P01562 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
IFNA1P01562 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
IFNA1P01562 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC12.99□□□□□ -0.33
IFNA1P01562 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC12.99□□□□□ -0.33
IFNA1P01562 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC12.99□□□□□ -0.33
IFNA1P01562 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC12.99□□□□□ -0.33
IFNA1P01562 RPS20-210ENST00000523936 899 ntTSL 2 BASIC12.99□□□□□ -0.33
IFNA1P01562 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC12.99□□□□□ -0.33
IFNA1P01562 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
IFNA1P01562 AL136038.4-201ENST00000603606 1261 ntBASIC12.99□□□□□ -0.33
IFNA1P01562 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC12.99□□□□□ -0.33
IFNA1P01562 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
IFNA1P01562 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
IFNA1P01562 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
IFNA1P01562 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
IFNA1P01562 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC12.99□□□□□ -0.33
IFNA1P01562 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
IFNA1P01562 LINC01144-201ENST00000626198 1710 ntBASIC12.99□□□□□ -0.33
IFNA1P01562 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
IFNA1P01562 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
IFNA1P01562 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC12.98□□□□□ -0.33
IFNA1P01562 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
IFNA1P01562 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
IFNA1P01562 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
IFNA1P01562 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
IFNA1P01562 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
IFNA1P01562 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
IFNA1P01562 AL353692.3-201ENST00000407031 1396 ntBASIC12.98□□□□□ -0.33
IFNA1P01562 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
IFNA1P01562 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC12.98□□□□□ -0.33
IFNA1P01562 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC12.98□□□□□ -0.33
IFNA1P01562 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
IFNA1P01562 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
IFNA1P01562 TPO-203ENST00000346956 2923 ntTSL 5 BASIC12.98□□□□□ -0.33
IFNA1P01562 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC12.98□□□□□ -0.33
IFNA1P01562 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
IFNA1P01562 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
IFNA1P01562 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
IFNA1P01562 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC12.98□□□□□ -0.33
IFNA1P01562 AC107956.1-201ENST00000494359 873 ntBASIC12.98□□□□□ -0.33
IFNA1P01562 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC12.98□□□□□ -0.33
IFNA1P01562 RPPH1-201ENST00000516869 333 ntBASIC12.98□□□□□ -0.33
IFNA1P01562 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC12.98□□□□□ -0.33
IFNA1P01562 AP001412.1-201ENST00000608405 714 ntBASIC12.98□□□□□ -0.33
IFNA1P01562 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
IFNA1P01562 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC12.98□□□□□ -0.33
IFNA1P01562 FAM197Y4-202ENST00000622692 608 ntBASIC12.98□□□□□ -0.33
IFNA1P01562 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
IFNA1P01562 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
IFNA1P01562 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
IFNA1P01562 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
IFNA1P01562 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
IFNA1P01562 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
IFNA1P01562 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
IFNA1P01562 AC023908.3-201ENST00000564211 3047 ntBASIC12.98□□□□□ -0.33
IFNA1P01562 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
IFNA1P01562 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
IFNA1P01562 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
IFNA1P01562 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
IFNA1P01562 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
IFNA1P01562 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
IFNA1P01562 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
IFNA1P01562 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC12.97□□□□□ -0.33
IFNA1P01562 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
IFNA1P01562 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
IFNA1P01562 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
IFNA1P01562 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
IFNA1P01562 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
IFNA1P01562 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
IFNA1P01562 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
IFNA1P01562 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
IFNA1P01562 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
IFNA1P01562 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
IFNA1P01562 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms