Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 AC105339.1-204ENST00000636249 355 ntBASIC15.07■□□□□ 0
NKX2-2O95096 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NKX2-2O95096 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NKX2-2O95096 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.07■□□□□ 0
NKX2-2O95096 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.07■□□□□ 0
NKX2-2O95096 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
NKX2-2O95096 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.07■□□□□ 0
NKX2-2O95096 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NKX2-2O95096 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NKX2-2O95096 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NKX2-2O95096 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NKX2-2O95096 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.07■□□□□ 0
NKX2-2O95096 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.07■□□□□ 0
NKX2-2O95096 LINC02447-202ENST00000501888 2146 ntBASIC15.07■□□□□ 0
NKX2-2O95096 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC15.07■□□□□ 0
NKX2-2O95096 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC15.07■□□□□ 0
NKX2-2O95096 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC15.07■□□□□ 0
NKX2-2O95096 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NKX2-2O95096 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.07■□□□□ 0
NKX2-2O95096 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC15.07■□□□□ 0
NKX2-2O95096 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
NKX2-2O95096 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.06■□□□□ 0
NKX2-2O95096 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC15.06■□□□□ 0
NKX2-2O95096 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
NKX2-2O95096 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NKX2-2O95096 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC15.06■□□□□ 0
NKX2-2O95096 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NKX2-2O95096 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NKX2-2O95096 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
NKX2-2O95096 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
NKX2-2O95096 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.06■□□□□ 0
NKX2-2O95096 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NKX2-2O95096 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NKX2-2O95096 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
NKX2-2O95096 RPSAP43-201ENST00000402237 625 ntBASIC15.06■□□□□ 0
NKX2-2O95096 COA5-202ENST00000409997 557 ntTSL 4 BASIC15.06■□□□□ 0
NKX2-2O95096 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC15.06■□□□□ 0
NKX2-2O95096 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC15.06■□□□□ 0
NKX2-2O95096 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC15.06■□□□□ 0
NKX2-2O95096 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC15.06■□□□□ 0
NKX2-2O95096 AC112482.1-201ENST00000492080 688 ntBASIC15.06■□□□□ 0
NKX2-2O95096 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC15.06■□□□□ 0
NKX2-2O95096 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC15.06■□□□□ 0
NKX2-2O95096 AC061975.2-201ENST00000581722 295 ntBASIC15.06■□□□□ 0
NKX2-2O95096 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC15.06■□□□□ 0
NKX2-2O95096 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC15.06■□□□□ 0
NKX2-2O95096 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.06■□□□□ 0
NKX2-2O95096 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NKX2-2O95096 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.06■□□□□ 0
NKX2-2O95096 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC15.06■□□□□ 0
NKX2-2O95096 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NKX2-2O95096 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
NKX2-2O95096 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC15.06■□□□□ 0
NKX2-2O95096 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NKX2-2O95096 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NKX2-2O95096 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NKX2-2O95096 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC15.06■□□□□ 0
NKX2-2O95096 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
NKX2-2O95096 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NKX2-2O95096 AC112504.1-201ENST00000623415 1841 ntBASIC15.06■□□□□ 0
NKX2-2O95096 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
NKX2-2O95096 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
NKX2-2O95096 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
NKX2-2O95096 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.05■□□□□ 0
NKX2-2O95096 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.05■□□□□ 0
NKX2-2O95096 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC15.05■□□□□ 0
NKX2-2O95096 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.05■□□□□ 0
NKX2-2O95096 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
NKX2-2O95096 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
NKX2-2O95096 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.05■□□□□ 0
NKX2-2O95096 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
NKX2-2O95096 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
NKX2-2O95096 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
NKX2-2O95096 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
NKX2-2O95096 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NKX2-2O95096 FAM220BP-201ENST00000377689 816 ntBASIC15.05■□□□□ -0
NKX2-2O95096 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC15.05■□□□□ -0
NKX2-2O95096 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC15.05■□□□□ -0
NKX2-2O95096 UPF3AP3-201ENST00000420996 769 ntBASIC15.05■□□□□ -0
NKX2-2O95096 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC15.05■□□□□ -0
NKX2-2O95096 AL592309.1-201ENST00000443127 649 ntBASIC15.05■□□□□ -0
NKX2-2O95096 AC069335.1-201ENST00000489972 472 ntBASIC15.05■□□□□ -0
NKX2-2O95096 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC15.05■□□□□ -0
NKX2-2O95096 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC15.05■□□□□ -0
NKX2-2O95096 MIR3687-2-201ENST00000577708 61 ntBASIC15.05■□□□□ -0
NKX2-2O95096 MIR4469-201ENST00000583919 79 ntBASIC15.05■□□□□ -0
NKX2-2O95096 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
NKX2-2O95096 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC15.05■□□□□ -0
NKX2-2O95096 AC022145.2-201ENST00000598203 171 ntBASIC15.05■□□□□ -0
NKX2-2O95096 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC15.05■□□□□ -0
NKX2-2O95096 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC15.05■□□□□ -0
NKX2-2O95096 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC15.05■□□□□ -0
NKX2-2O95096 MIR3687-1-201ENST00000614492 61 ntBASIC15.05■□□□□ -0
NKX2-2O95096 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NKX2-2O95096 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC15.05■□□□□ -0
NKX2-2O95096 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
NKX2-2O95096 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NKX2-2O95096 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
NKX2-2O95096 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
NKX2-2O95096 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC15.05■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms