Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC21.26■□□□□ 0.99
LTN1O94822 RPL7P3-201ENST00000441388 714 ntBASIC21.26■□□□□ 0.99
LTN1O94822 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC21.26■□□□□ 0.99
LTN1O94822 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
LTN1O94822 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC21.26■□□□□ 0.99
LTN1O94822 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC21.26■□□□□ 0.99
LTN1O94822 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
LTN1O94822 NOP2-211ENST00000540228 668 ntTSL 2 BASIC21.26■□□□□ 0.99
LTN1O94822 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC21.26■□□□□ 0.99
LTN1O94822 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC21.26■□□□□ 0.99
LTN1O94822 AL450472.2-201ENST00000603663 1156 ntBASIC21.26■□□□□ 0.99
LTN1O94822 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC21.26■□□□□ 0.99
LTN1O94822 ME2P1-201ENST00000426028 1970 ntBASIC21.26■□□□□ 0.99
LTN1O94822 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
LTN1O94822 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC21.26■□□□□ 0.99
LTN1O94822 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
LTN1O94822 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC21.26■□□□□ 0.99
LTN1O94822 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC21.25■□□□□ 0.99
LTN1O94822 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LTN1O94822 STX1A-203ENST00000395155 783 ntTSL 2 BASIC21.25■□□□□ 0.99
LTN1O94822 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC21.25■□□□□ 0.99
LTN1O94822 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC21.25■□□□□ 0.99
LTN1O94822 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC21.25■□□□□ 0.99
LTN1O94822 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
LTN1O94822 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC21.25■□□□□ 0.99
LTN1O94822 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LTN1O94822 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LTN1O94822 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC21.25■□□□□ 0.99
LTN1O94822 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC21.25■□□□□ 0.99
LTN1O94822 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC21.25■□□□□ 0.99
LTN1O94822 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
LTN1O94822 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
LTN1O94822 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
LTN1O94822 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LTN1O94822 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
LTN1O94822 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
LTN1O94822 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
LTN1O94822 MIR1908-201ENST00000410394 80 ntBASIC21.25■□□□□ 0.99
LTN1O94822 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC21.25■□□□□ 0.99
LTN1O94822 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
LTN1O94822 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC21.25■□□□□ 0.99
LTN1O94822 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC21.25■□□□□ 0.99
LTN1O94822 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
LTN1O94822 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC21.25■□□□□ 0.99
LTN1O94822 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LTN1O94822 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
LTN1O94822 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LTN1O94822 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC21.24■□□□□ 0.99
LTN1O94822 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
LTN1O94822 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
LTN1O94822 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
LTN1O94822 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LTN1O94822 TUBB1P2-201ENST00000422712 1306 ntBASIC21.24■□□□□ 0.99
LTN1O94822 TUBB1P1-201ENST00000503144 1300 ntBASIC21.24■□□□□ 0.99
LTN1O94822 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
LTN1O94822 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC21.24■□□□□ 0.99
LTN1O94822 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC21.24■□□□□ 0.99
LTN1O94822 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC21.24■□□□□ 0.99
LTN1O94822 PHKG1P2-201ENST00000457537 863 ntBASIC21.24■□□□□ 0.99
LTN1O94822 AC108725.1-201ENST00000495472 409 ntBASIC21.24■□□□□ 0.99
LTN1O94822 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC21.24■□□□□ 0.99
LTN1O94822 SLC25A47P1-201ENST00000531577 414 ntBASIC21.24■□□□□ 0.99
LTN1O94822 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC21.24■□□□□ 0.99
LTN1O94822 AC097359.3-201ENST00000603982 1210 ntBASIC21.24■□□□□ 0.99
LTN1O94822 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
LTN1O94822 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
LTN1O94822 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
LTN1O94822 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
LTN1O94822 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC21.24■□□□□ 0.99
LTN1O94822 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LTN1O94822 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
LTN1O94822 TP73-209ENST00000603362 1668 ntTSL 5 BASIC21.24■□□□□ 0.99
LTN1O94822 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
LTN1O94822 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
LTN1O94822 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC21.24■□□□□ 0.99
LTN1O94822 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
LTN1O94822 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LTN1O94822 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC21.23■□□□□ 0.99
LTN1O94822 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
LTN1O94822 ALOX12P2-203ENST00000570921 1945 ntBASIC21.23■□□□□ 0.99
LTN1O94822 FAM21FP-201ENST00000426241 1131 ntBASIC21.23■□□□□ 0.99
LTN1O94822 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
LTN1O94822 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
LTN1O94822 KLF2P4-201ENST00000451959 1225 ntBASIC21.23■□□□□ 0.99
LTN1O94822 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
LTN1O94822 CMC2-214ENST00000565925 640 ntTSL 5 BASIC21.23■□□□□ 0.99
LTN1O94822 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC21.23■□□□□ 0.99
LTN1O94822 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
LTN1O94822 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC21.23■□□□□ 0.99
LTN1O94822 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
LTN1O94822 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
LTN1O94822 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LTN1O94822 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC21.23■□□□□ 0.99
LTN1O94822 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
LTN1O94822 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC21.23■□□□□ 0.99
LTN1O94822 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
LTN1O94822 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC21.23■□□□□ 0.99
LTN1O94822 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LTN1O94822 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LTN1O94822 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms