Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC20.28■□□□□ 0.84
CACNA1FO60840 MEIS3P1-201ENST00000495167 958 ntBASIC20.28■□□□□ 0.84
CACNA1FO60840 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
CACNA1FO60840 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC20.28■□□□□ 0.84
CACNA1FO60840 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC20.28■□□□□ 0.84
CACNA1FO60840 AC138761.1-201ENST00000584393 385 ntBASIC20.28■□□□□ 0.84
CACNA1FO60840 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC20.28■□□□□ 0.84
CACNA1FO60840 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CACNA1FO60840 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
CACNA1FO60840 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CACNA1FO60840 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC20.28■□□□□ 0.84
CACNA1FO60840 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CACNA1FO60840 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC20.27■□□□□ 0.84
CACNA1FO60840 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC20.27■□□□□ 0.84
CACNA1FO60840 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CACNA1FO60840 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC20.27■□□□□ 0.84
CACNA1FO60840 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC20.27■□□□□ 0.84
CACNA1FO60840 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CACNA1FO60840 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CACNA1FO60840 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC20.27■□□□□ 0.84
CACNA1FO60840 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CACNA1FO60840 AL035633.1-201ENST00000406139 838 ntBASIC20.27■□□□□ 0.84
CACNA1FO60840 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC20.27■□□□□ 0.84
CACNA1FO60840 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
CACNA1FO60840 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC20.27■□□□□ 0.84
CACNA1FO60840 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC20.27■□□□□ 0.84
CACNA1FO60840 SPDYE22P-201ENST00000582158 798 ntBASIC20.27■□□□□ 0.84
CACNA1FO60840 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CACNA1FO60840 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CACNA1FO60840 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC20.27■□□□□ 0.84
CACNA1FO60840 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC20.27■□□□□ 0.83
CACNA1FO60840 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CACNA1FO60840 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
CACNA1FO60840 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.83
CACNA1FO60840 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.27■□□□□ 0.83
CACNA1FO60840 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC20.27■□□□□ 0.83
CACNA1FO60840 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
CACNA1FO60840 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC20.26■□□□□ 0.83
CACNA1FO60840 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC20.26■□□□□ 0.83
CACNA1FO60840 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CACNA1FO60840 TPRX2P-201ENST00000535362 881 ntBASIC20.26■□□□□ 0.83
CACNA1FO60840 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC20.26■□□□□ 0.83
CACNA1FO60840 RRP7BP-205ENST00000566851 833 ntBASIC20.26■□□□□ 0.83
CACNA1FO60840 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
CACNA1FO60840 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CACNA1FO60840 AL391005.1-201ENST00000623953 2435 ntBASIC20.26■□□□□ 0.83
CACNA1FO60840 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CACNA1FO60840 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
CACNA1FO60840 AC026691.1-201ENST00000602502 2017 ntBASIC20.26■□□□□ 0.83
CACNA1FO60840 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
CACNA1FO60840 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC20.26■□□□□ 0.83
CACNA1FO60840 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC20.26■□□□□ 0.83
CACNA1FO60840 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CACNA1FO60840 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC20.26■□□□□ 0.83
CACNA1FO60840 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CACNA1FO60840 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CACNA1FO60840 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CACNA1FO60840 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CACNA1FO60840 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CACNA1FO60840 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC20.26■□□□□ 0.83
CACNA1FO60840 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC20.26■□□□□ 0.83
CACNA1FO60840 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC20.26■□□□□ 0.83
CACNA1FO60840 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CACNA1FO60840 AC135586.1-201ENST00000539323 574 ntBASIC20.26■□□□□ 0.83
CACNA1FO60840 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC20.26■□□□□ 0.83
CACNA1FO60840 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC20.26■□□□□ 0.83
CACNA1FO60840 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC20.26■□□□□ 0.83
CACNA1FO60840 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CACNA1FO60840 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CACNA1FO60840 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CACNA1FO60840 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC20.26■□□□□ 0.83
CACNA1FO60840 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CACNA1FO60840 AC011477.6-201ENST00000604980 1927 ntBASIC20.25■□□□□ 0.83
CACNA1FO60840 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC20.25■□□□□ 0.83
CACNA1FO60840 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CACNA1FO60840 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
CACNA1FO60840 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CACNA1FO60840 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC20.25■□□□□ 0.83
CACNA1FO60840 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CACNA1FO60840 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CACNA1FO60840 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC20.25■□□□□ 0.83
CACNA1FO60840 FXR1-221ENST00000491674 365 ntTSL 2 BASIC20.25■□□□□ 0.83
CACNA1FO60840 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC20.25■□□□□ 0.83
CACNA1FO60840 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC20.25■□□□□ 0.83
CACNA1FO60840 AC099568.2-201ENST00000609194 695 ntBASIC20.25■□□□□ 0.83
CACNA1FO60840 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC20.25■□□□□ 0.83
CACNA1FO60840 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CACNA1FO60840 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC20.25■□□□□ 0.83
CACNA1FO60840 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC20.25■□□□□ 0.83
CACNA1FO60840 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC20.25■□□□□ 0.83
CACNA1FO60840 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC20.25■□□□□ 0.83
CACNA1FO60840 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CACNA1FO60840 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CACNA1FO60840 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CACNA1FO60840 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
CACNA1FO60840 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
CACNA1FO60840 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC20.25■□□□□ 0.83
CACNA1FO60840 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CACNA1FO60840 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CACNA1FO60840 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms