Protein–RNA interactions for Protein: O60479

DLX3, Homeobox protein DLX-3, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DLX3O60479 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
DLX3O60479 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.04■□□□□ 0.16
DLX3O60479 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
DLX3O60479 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.04■□□□□ 0.16
DLX3O60479 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
DLX3O60479 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
DLX3O60479 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
DLX3O60479 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
DLX3O60479 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.04■□□□□ 0.16
DLX3O60479 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.04■□□□□ 0.16
DLX3O60479 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
DLX3O60479 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
DLX3O60479 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
DLX3O60479 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
DLX3O60479 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.04■□□□□ 0.16
DLX3O60479 AL513480.1-201ENST00000451731 511 ntBASIC16.04■□□□□ 0.16
DLX3O60479 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
DLX3O60479 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC16.04■□□□□ 0.16
DLX3O60479 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.04■□□□□ 0.16
DLX3O60479 AL031432.2-201ENST00000566714 459 ntBASIC16.04■□□□□ 0.16
DLX3O60479 AL928711.1-201ENST00000570165 459 ntBASIC16.04■□□□□ 0.16
DLX3O60479 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
DLX3O60479 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.04■□□□□ 0.16
DLX3O60479 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.04■□□□□ 0.16
DLX3O60479 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC16.04■□□□□ 0.16
DLX3O60479 AL645728.2-201ENST00000641974 660 ntBASIC16.04■□□□□ 0.16
DLX3O60479 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
DLX3O60479 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
DLX3O60479 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.04■□□□□ 0.16
DLX3O60479 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
DLX3O60479 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
DLX3O60479 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
DLX3O60479 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
DLX3O60479 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
DLX3O60479 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
DLX3O60479 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
DLX3O60479 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
DLX3O60479 PPT1-215ENST00000641471 2368 ntBASIC16.04■□□□□ 0.16
DLX3O60479 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
DLX3O60479 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
DLX3O60479 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
DLX3O60479 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
DLX3O60479 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
DLX3O60479 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
DLX3O60479 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
DLX3O60479 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
DLX3O60479 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.03■□□□□ 0.16
DLX3O60479 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
DLX3O60479 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
DLX3O60479 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
DLX3O60479 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.03■□□□□ 0.16
DLX3O60479 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.03■□□□□ 0.16
DLX3O60479 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.03■□□□□ 0.16
DLX3O60479 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
DLX3O60479 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.03■□□□□ 0.16
DLX3O60479 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
DLX3O60479 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
DLX3O60479 RPS2P28-201ENST00000314255 741 ntBASIC16.03■□□□□ 0.16
DLX3O60479 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
DLX3O60479 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC16.03■□□□□ 0.16
DLX3O60479 MED22-202ENST00000371999 987 ntTSL 3 BASIC16.03■□□□□ 0.16
DLX3O60479 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.03■□□□□ 0.16
DLX3O60479 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.03■□□□□ 0.16
DLX3O60479 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.03■□□□□ 0.16
DLX3O60479 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
DLX3O60479 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.03■□□□□ 0.16
DLX3O60479 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.03■□□□□ 0.16
DLX3O60479 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
DLX3O60479 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
DLX3O60479 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
DLX3O60479 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
DLX3O60479 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
DLX3O60479 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
DLX3O60479 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.03■□□□□ 0.16
DLX3O60479 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
DLX3O60479 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
DLX3O60479 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.03■□□□□ 0.16
DLX3O60479 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.03■□□□□ 0.16
DLX3O60479 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
DLX3O60479 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
DLX3O60479 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
DLX3O60479 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16.02■□□□□ 0.16
DLX3O60479 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.02■□□□□ 0.16
DLX3O60479 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
DLX3O60479 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
DLX3O60479 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
DLX3O60479 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
DLX3O60479 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.02■□□□□ 0.16
DLX3O60479 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.02■□□□□ 0.16
DLX3O60479 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
DLX3O60479 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
DLX3O60479 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.02■□□□□ 0.16
DLX3O60479 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.02■□□□□ 0.16
DLX3O60479 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.02■□□□□ 0.16
DLX3O60479 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
DLX3O60479 AC093724.1-201ENST00000448659 1027 ntBASIC16.02■□□□□ 0.16
DLX3O60479 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC16.02■□□□□ 0.16
DLX3O60479 AC092910.1-201ENST00000482027 1129 ntBASIC16.02■□□□□ 0.16
DLX3O60479 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.02■□□□□ 0.16
DLX3O60479 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms