Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
HOXA2O43364 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HOXA2O43364 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HOXA2O43364 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC17.36■□□□□ 0.37
HOXA2O43364 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
HOXA2O43364 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HOXA2O43364 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HOXA2O43364 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HOXA2O43364 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.36■□□□□ 0.37
HOXA2O43364 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HOXA2O43364 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
HOXA2O43364 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HOXA2O43364 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HOXA2O43364 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HOXA2O43364 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.35■□□□□ 0.37
HOXA2O43364 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HOXA2O43364 AC105020.1-201ENST00000435356 2205 ntBASIC17.35■□□□□ 0.37
HOXA2O43364 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HOXA2O43364 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.35■□□□□ 0.37
HOXA2O43364 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
HOXA2O43364 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
HOXA2O43364 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.35■□□□□ 0.37
HOXA2O43364 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.35■□□□□ 0.37
HOXA2O43364 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HOXA2O43364 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HOXA2O43364 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
HOXA2O43364 ACA64.2-201ENST00000459014 129 ntBASIC17.35■□□□□ 0.37
HOXA2O43364 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC17.35■□□□□ 0.37
HOXA2O43364 GLI4-203ENST00000517468 963 ntTSL 5 BASIC17.35■□□□□ 0.37
HOXA2O43364 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC17.35■□□□□ 0.37
HOXA2O43364 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC17.35■□□□□ 0.37
HOXA2O43364 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC17.35■□□□□ 0.37
HOXA2O43364 RAB43P1-201ENST00000561790 589 ntBASIC17.35■□□□□ 0.37
HOXA2O43364 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC17.35■□□□□ 0.37
HOXA2O43364 CTBP2P3-201ENST00000585629 1255 ntBASIC17.35■□□□□ 0.37
HOXA2O43364 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
HOXA2O43364 APOC4-201ENST00000591600 348 ntTSL 3 BASIC17.35■□□□□ 0.37
HOXA2O43364 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC17.35■□□□□ 0.37
HOXA2O43364 MIR6805-201ENST00000615055 62 ntBASIC17.35■□□□□ 0.37
HOXA2O43364 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.35■□□□□ 0.37
HOXA2O43364 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HOXA2O43364 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
HOXA2O43364 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC17.35■□□□□ 0.37
HOXA2O43364 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
HOXA2O43364 Z97205.2-201ENST00000564697 1639 ntBASIC17.35■□□□□ 0.37
HOXA2O43364 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HOXA2O43364 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
HOXA2O43364 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HOXA2O43364 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC17.35■□□□□ 0.37
HOXA2O43364 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HOXA2O43364 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.35■□□□□ 0.37
HOXA2O43364 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.34■□□□□ 0.37
HOXA2O43364 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.34■□□□□ 0.37
HOXA2O43364 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
HOXA2O43364 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
HOXA2O43364 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HOXA2O43364 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HOXA2O43364 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HOXA2O43364 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HOXA2O43364 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HOXA2O43364 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
HOXA2O43364 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HOXA2O43364 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HOXA2O43364 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC17.34■□□□□ 0.37
HOXA2O43364 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HOXA2O43364 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HOXA2O43364 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.34■□□□□ 0.37
HOXA2O43364 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
HOXA2O43364 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC17.34■□□□□ 0.37
HOXA2O43364 ELP6-209ENST00000446787 894 ntTSL 3 BASIC17.34■□□□□ 0.37
HOXA2O43364 AC007389.4-201ENST00000454674 793 ntBASIC17.34■□□□□ 0.37
HOXA2O43364 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HOXA2O43364 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HOXA2O43364 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
HOXA2O43364 KRT17P8-201ENST00000540749 863 ntBASIC17.34■□□□□ 0.37
HOXA2O43364 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
HOXA2O43364 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HOXA2O43364 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC17.34■□□□□ 0.37
HOXA2O43364 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
HOXA2O43364 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC17.34■□□□□ 0.37
HOXA2O43364 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HOXA2O43364 AC005915.1-201ENST00000624912 2018 ntBASIC17.34■□□□□ 0.37
HOXA2O43364 SERF2-217ENST00000630046 862 ntTSL 5 BASIC17.34■□□□□ 0.37
HOXA2O43364 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HOXA2O43364 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.34■□□□□ 0.37
HOXA2O43364 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HOXA2O43364 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.34■□□□□ 0.37
HOXA2O43364 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC17.33■□□□□ 0.37
HOXA2O43364 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
HOXA2O43364 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HOXA2O43364 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.33■□□□□ 0.37
HOXA2O43364 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
HOXA2O43364 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HOXA2O43364 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HOXA2O43364 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.33■□□□□ 0.37
HOXA2O43364 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
HOXA2O43364 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.33■□□□□ 0.37
HOXA2O43364 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HOXA2O43364 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
HOXA2O43364 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC17.33■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms