Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.96■□□□□ 0.3
MSI1O43347 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.96■□□□□ 0.3
MSI1O43347 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.3
MSI1O43347 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
MSI1O43347 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
MSI1O43347 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
MSI1O43347 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
MSI1O43347 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MSI1O43347 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC16.95■□□□□ 0.3
MSI1O43347 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.95■□□□□ 0.3
MSI1O43347 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MSI1O43347 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
MSI1O43347 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MSI1O43347 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
MSI1O43347 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MSI1O43347 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MSI1O43347 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
MSI1O43347 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.95■□□□□ 0.3
MSI1O43347 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MSI1O43347 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.95■□□□□ 0.3
MSI1O43347 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
MSI1O43347 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MSI1O43347 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
MSI1O43347 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MSI1O43347 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.95■□□□□ 0.3
MSI1O43347 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.95■□□□□ 0.3
MSI1O43347 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
MSI1O43347 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC16.95■□□□□ 0.3
MSI1O43347 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MSI1O43347 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
MSI1O43347 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
MSI1O43347 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC16.95■□□□□ 0.3
MSI1O43347 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.95■□□□□ 0.3
MSI1O43347 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
MSI1O43347 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.95■□□□□ 0.3
MSI1O43347 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
MSI1O43347 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MSI1O43347 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
MSI1O43347 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MSI1O43347 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.94■□□□□ 0.3
MSI1O43347 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
MSI1O43347 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MSI1O43347 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
MSI1O43347 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MSI1O43347 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
MSI1O43347 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
MSI1O43347 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC16.94■□□□□ 0.3
MSI1O43347 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MSI1O43347 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
MSI1O43347 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.94■□□□□ 0.3
MSI1O43347 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MSI1O43347 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
MSI1O43347 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
MSI1O43347 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.94■□□□□ 0.3
MSI1O43347 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.94■□□□□ 0.3
MSI1O43347 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
MSI1O43347 AC067863.1-201ENST00000494933 530 ntBASIC16.94■□□□□ 0.3
MSI1O43347 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC16.94■□□□□ 0.3
MSI1O43347 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.94■□□□□ 0.3
MSI1O43347 AC061975.2-201ENST00000581722 295 ntBASIC16.94■□□□□ 0.3
MSI1O43347 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
MSI1O43347 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.94■□□□□ 0.3
MSI1O43347 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
MSI1O43347 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MSI1O43347 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MSI1O43347 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MSI1O43347 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
MSI1O43347 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
MSI1O43347 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
MSI1O43347 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.94■□□□□ 0.3
MSI1O43347 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
MSI1O43347 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
MSI1O43347 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
MSI1O43347 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
MSI1O43347 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.93■□□□□ 0.3
MSI1O43347 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
MSI1O43347 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.93■□□□□ 0.3
MSI1O43347 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MSI1O43347 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
MSI1O43347 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MSI1O43347 AC018695.7-201ENST00000624587 2492 ntBASIC16.93■□□□□ 0.3
MSI1O43347 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
MSI1O43347 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MSI1O43347 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MSI1O43347 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
MSI1O43347 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
MSI1O43347 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC16.93■□□□□ 0.3
MSI1O43347 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC16.93■□□□□ 0.3
MSI1O43347 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.93■□□□□ 0.3
MSI1O43347 CROCCP1-201ENST00000426910 5675 ntBASIC16.93■□□□□ 0.3
MSI1O43347 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
MSI1O43347 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
MSI1O43347 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.93■□□□□ 0.3
MSI1O43347 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MSI1O43347 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MSI1O43347 AC107890.1-201ENST00000422478 521 ntBASIC16.93■□□□□ 0.3
MSI1O43347 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MSI1O43347 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
MSI1O43347 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC16.93■□□□□ 0.3
MSI1O43347 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms