Protein–RNA interactions for Protein: O43312

MTSS1, Metastasis suppressor protein 1, humanhuman

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTSS1O43312 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MTSS1O43312 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.72■□□□□ 0.27
MTSS1O43312 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
MTSS1O43312 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.72■□□□□ 0.27
MTSS1O43312 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.72■□□□□ 0.27
MTSS1O43312 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MTSS1O43312 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
MTSS1O43312 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.72■□□□□ 0.27
MTSS1O43312 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
MTSS1O43312 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
MTSS1O43312 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
MTSS1O43312 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.72■□□□□ 0.27
MTSS1O43312 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.72■□□□□ 0.27
MTSS1O43312 AC002347.1-201ENST00000569543 541 ntBASIC16.72■□□□□ 0.27
MTSS1O43312 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
MTSS1O43312 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.72■□□□□ 0.27
MTSS1O43312 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MTSS1O43312 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
MTSS1O43312 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MTSS1O43312 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MTSS1O43312 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MTSS1O43312 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
MTSS1O43312 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
MTSS1O43312 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
MTSS1O43312 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
MTSS1O43312 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.72■□□□□ 0.27
MTSS1O43312 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MTSS1O43312 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MTSS1O43312 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MTSS1O43312 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
MTSS1O43312 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
MTSS1O43312 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
MTSS1O43312 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
MTSS1O43312 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
MTSS1O43312 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MTSS1O43312 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.71■□□□□ 0.27
MTSS1O43312 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
MTSS1O43312 AL603832.2-201ENST00000566195 2125 ntBASIC16.71■□□□□ 0.27
MTSS1O43312 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
MTSS1O43312 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.71■□□□□ 0.27
MTSS1O43312 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
MTSS1O43312 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.71■□□□□ 0.27
MTSS1O43312 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MTSS1O43312 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
MTSS1O43312 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.71■□□□□ 0.27
MTSS1O43312 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
MTSS1O43312 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MTSS1O43312 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
MTSS1O43312 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.71■□□□□ 0.27
MTSS1O43312 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MTSS1O43312 AL365203.3-201ENST00000609742 2057 ntBASIC16.71■□□□□ 0.27
MTSS1O43312 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.71■□□□□ 0.27
MTSS1O43312 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.71■□□□□ 0.26
MTSS1O43312 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
MTSS1O43312 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MTSS1O43312 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.7■□□□□ 0.26
MTSS1O43312 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MTSS1O43312 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MTSS1O43312 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
MTSS1O43312 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
MTSS1O43312 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MTSS1O43312 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MTSS1O43312 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
MTSS1O43312 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MTSS1O43312 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.7■□□□□ 0.26
MTSS1O43312 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.7■□□□□ 0.26
MTSS1O43312 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
MTSS1O43312 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.7■□□□□ 0.26
MTSS1O43312 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
MTSS1O43312 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MTSS1O43312 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.7■□□□□ 0.26
MTSS1O43312 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.7■□□□□ 0.26
MTSS1O43312 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
MTSS1O43312 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.7■□□□□ 0.26
MTSS1O43312 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC16.7■□□□□ 0.26
MTSS1O43312 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
MTSS1O43312 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
MTSS1O43312 LINC02084-201ENST00000606069 1096 ntBASIC16.7■□□□□ 0.26
MTSS1O43312 AC099522.2-201ENST00000607001 744 ntBASIC16.7■□□□□ 0.26
MTSS1O43312 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.7■□□□□ 0.26
MTSS1O43312 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.7■□□□□ 0.26
MTSS1O43312 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
MTSS1O43312 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.7■□□□□ 0.26
MTSS1O43312 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
MTSS1O43312 AL589702.1-201ENST00000641229 1509 ntBASIC16.7■□□□□ 0.26
MTSS1O43312 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
MTSS1O43312 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.7■□□□□ 0.26
MTSS1O43312 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MTSS1O43312 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
MTSS1O43312 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
MTSS1O43312 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.69■□□□□ 0.26
MTSS1O43312 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
MTSS1O43312 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MTSS1O43312 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MTSS1O43312 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MTSS1O43312 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
MTSS1O43312 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.69■□□□□ 0.26
MTSS1O43312 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
MTSS1O43312 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MTSS1O43312 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms